Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 GTF2F2P1-201ENST00000511083 675 ntBASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 OR11H3P-201ENST00000554547 982 ntBASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 AC135068.5-201ENST00000624197 983 ntBASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 AC006600.2-201ENST00000624834 2506 ntBASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
CSMD1Q96PZ7 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 MITF-203ENST00000328528 4680 ntTSL 5 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 WBP11P1-201ENST00000562560 1931 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 RPL23AP17-201ENST00000401064 499 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AC008280.1-201ENST00000418851 412 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 MRPS21P2-201ENST00000424704 264 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 RPL17P2-201ENST00000491913 451 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 OR8A2P-201ENST00000528631 952 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 OR5AM1P-201ENST00000532136 1032 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AC105254.2-201ENST00000603636 436 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AL591034.3-201ENST00000605511 685 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AC005858.4-201ENST00000623191 700 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 MVP-219ENST00000629059 120 ntTSL 5 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 DLG2-201ENST00000280241 7730 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 SNORD8-201ENST00000363915 110 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 Z95327.1-201ENST00000446082 482 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 SCARNA20.4-201ENST00000516969 131 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AC090948.2-201ENST00000607363 564 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AL627171.1-201ENST00000618845 1308 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 SNORA11.1-201ENST00000408133 129 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 AC105129.1-201ENST00000560250 297 ntBASIC4.32□□□□□ -1.72
CSMD1Q96PZ7 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 DSC3-202ENST00000434452 6978 ntTSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 OR1L6-202ENST00000373684 1044 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 RNU1-13P-201ENST00000384499 162 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 RPL23AP24-201ENST00000458203 385 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 MIR3939-201ENST00000582614 106 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AC008814.1-201ENST00000603797 406 ntBASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 PPARA-201ENST00000262735 9965 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC4.31□□□□□ -1.72
CSMD1Q96PZ7 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms