Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC7Q96M83 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC7Q96M83 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC7Q96M83 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC7Q96M83 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC7Q96M83 RNA5SP241-201ENST00000391326 114 ntBASIC7.44□□□□□ -1.22
CCDC7Q96M83 RPL7P58-201ENST00000402913 758 ntBASIC7.44□□□□□ -1.22
CCDC7Q96M83 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 RPL7P6-201ENST00000480903 738 ntBASIC7.44□□□□□ -1.22
CCDC7Q96M83 RN7SKP99-201ENST00000517028 307 ntBASIC7.44□□□□□ -1.22
CCDC7Q96M83 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC7.44□□□□□ -1.22
CCDC7Q96M83 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
CCDC7Q96M83 AP001029.2-203ENST00000589795 4910 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC7Q96M83 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC7Q96M83 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC7Q96M83 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC7Q96M83 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC7Q96M83 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 OR9G4-201ENST00000302957 984 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC7Q96M83 RNA5SP487-201ENST00000410186 122 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 AC016772.1-201ENST00000444170 1261 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 AC073850.1-201ENST00000449243 255 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 AL451063.1-201ENST00000450164 1133 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 RN7SL423P-201ENST00000486202 304 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 RPS12P31-201ENST00000491419 398 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 RNU6-941P-201ENST00000516346 108 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 AC027369.5-201ENST00000533838 755 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 YWHABP2-201ENST00000540201 713 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 OR1F2P-201ENST00000570470 933 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 AC005341.1-201ENST00000571086 708 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 AC009163.6-201ENST00000612367 342 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 MIR6839-201ENST00000620425 113 ntBASIC7.43□□□□□ -1.22
CCDC7Q96M83 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC7Q96M83 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC7Q96M83 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
CCDC7Q96M83 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC7.43□□□□□ -1.22
CCDC7Q96M83 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC7Q96M83 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC7Q96M83 AC018765.1-201ENST00000623357 3446 ntBASIC7.42□□□□□ -1.22
CCDC7Q96M83 HSPA8P18-201ENST00000439846 1928 ntBASIC7.42□□□□□ -1.22
CCDC7Q96M83 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC7Q96M83 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 AL139128.1-201ENST00000413921 941 ntBASIC7.42□□□□□ -1.22
CCDC7Q96M83 RPL19P16-201ENST00000433839 588 ntBASIC7.42□□□□□ -1.22
CCDC7Q96M83 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 OR11J2P-201ENST00000555298 907 ntBASIC7.42□□□□□ -1.22
CCDC7Q96M83 MTCYBP13-201ENST00000578634 1093 ntBASIC7.42□□□□□ -1.22
CCDC7Q96M83 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 AC006116.3-201ENST00000592968 361 ntBASIC7.42□□□□□ -1.22
CCDC7Q96M83 AC104785.1-201ENST00000603220 588 ntBASIC7.42□□□□□ -1.22
CCDC7Q96M83 AC008814.1-201ENST00000603797 406 ntBASIC7.42□□□□□ -1.22
CCDC7Q96M83 AC009027.1-201ENST00000604510 479 ntBASIC7.42□□□□□ -1.22
CCDC7Q96M83 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC7Q96M83 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC7Q96M83 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
CCDC7Q96M83 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.42□□□□□ -1.22
CCDC7Q96M83 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.41□□□□□ -1.22
CCDC7Q96M83 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC7Q96M83 ERVFRD-3-201ENST00000578561 1617 ntBASIC7.41□□□□□ -1.22
CCDC7Q96M83 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC7Q96M83 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CCDC7Q96M83 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC7Q96M83 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC7Q96M83 ABCA11P-202ENST00000504019 2110 ntBASIC7.41□□□□□ -1.22
CCDC7Q96M83 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.41□□□□□ -1.22
CCDC7Q96M83 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC7Q96M83 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC7Q96M83 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CCDC7Q96M83 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CCDC7Q96M83 HYALP1-201ENST00000417674 1279 ntBASIC7.41□□□□□ -1.22
CCDC7Q96M83 RPS26P13-201ENST00000419030 330 ntBASIC7.41□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms