Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC093770.1-201ENST00000511559 571 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC091078.2-201ENST00000557145 559 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AP005119.1-201ENST00000580956 292 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 NANOGP3-201ENST00000605855 286 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 AP001437.1-201ENST00000608783 456 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 MIR6780B-201ENST00000610307 79 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PTP4A1Q93096 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.2□□□□□ -1.58
PTP4A1Q93096 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.2□□□□□ -1.58
PTP4A1Q93096 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTP4A1Q93096 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PTP4A1Q93096 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 CASC19-248ENST00000641674 1356 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 SMG1P6-201ENST00000532337 2930 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 RNU6-532P-201ENST00000384318 107 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 MIR320B1-201ENST00000390209 79 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AL391422.1-201ENST00000402155 436 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 AL136116.2-201ENST00000404020 785 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC099535.1-201ENST00000408928 371 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 GAPDHP34-201ENST00000432112 823 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 NDUFA5P10-201ENST00000432147 357 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 MED28P3-201ENST00000444288 531 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 RN7SL168P-201ENST00000463821 279 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 RN7SL197P-201ENST00000466981 299 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC098847.1-201ENST00000473094 348 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC012414.2-201ENST00000559474 187 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC002310.3-201ENST00000569728 723 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC079791.1-201ENST00000605356 973 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 AL021918.2-201ENST00000613415 194 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 AC020658.4-201ENST00000613987 684 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.19□□□□□ -1.58
PTP4A1Q93096 OR11H2-202ENST00000641517 1085 ntBASIC5.19□□□□□ -1.58
PTP4A1Q93096 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PTP4A1Q93096 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms