Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.35□□□□□ -1.55
TM9SF4Q92544 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.35□□□□□ -1.55
TM9SF4Q92544 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.35□□□□□ -1.55
TM9SF4Q92544 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM9SF4Q92544 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
TM9SF4Q92544 LINC02019-201ENST00000608605 2060 ntBASIC5.35□□□□□ -1.55
TM9SF4Q92544 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
TM9SF4Q92544 AC239868.2-201ENST00000564237 4527 ntBASIC5.35□□□□□ -1.55
TM9SF4Q92544 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF4Q92544 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF4Q92544 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF4Q92544 YES1P1-201ENST00000418510 1628 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF4Q92544 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF4Q92544 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF4Q92544 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 GAPDHP42-201ENST00000406848 981 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 AL596448.1-201ENST00000415024 392 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 VTI1BP4-201ENST00000427516 527 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 MTCO3P43-201ENST00000440974 771 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 SDC4P-201ENST00000453285 601 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 RPS23P6-201ENST00000466136 431 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF4Q92544 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 AC004825.1-201ENST00000555068 586 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 AC015720.2-201ENST00000567709 334 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.34□□□□□ -1.55
TM9SF4Q92544 AC090607.5-201ENST00000615692 224 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 MIR6730-201ENST00000622213 67 ntBASIC5.34□□□□□ -1.55
TM9SF4Q92544 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF4Q92544 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF4Q92544 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
TM9SF4Q92544 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.34□□□□□ -1.56
TM9SF4Q92544 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AL158152.1-201ENST00000602652 1435 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC005261.6-201ENST00000623072 1387 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 MIR1286-201ENST00000408112 78 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 OR6E1P-201ENST00000414424 923 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 Z85994.2-201ENST00000434327 452 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC073072.2-201ENST00000447425 348 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 LDHBP2-201ENST00000456969 1005 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 RN7SL72P-201ENST00000460697 269 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 AP002371.1-201ENST00000463604 433 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 RN7SL583P-201ENST00000475692 287 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 NPM1P28-201ENST00000492269 840 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC010487.1-201ENST00000594408 1172 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC008115.4-201ENST00000619780 775 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC080188.3-201ENST00000624842 748 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AC116158.1-201ENST00000560231 2129 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
TM9SF4Q92544 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
TM9SF4Q92544 AP000473.2-201ENST00000602659 1537 ntBASIC5.33□□□□□ -1.56
TM9SF4Q92544 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms