Protein–RNA interactions for Protein: Q8N205

SYNE4, Nesprin-4, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4Q8N205 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 AC127381.1-201ENST00000555979 939 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 NOP10-202ENST00000557912 436 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 AP005403.1-201ENST00000579720 229 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 GMCL1P2-201ENST00000605230 823 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 AL049777.1-201ENST00000622740 518 ntBASIC6.92□□□□□ -1.3
SYNE4Q8N205 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.92□□□□□ -1.3
SYNE4Q8N205 LINC00293-204ENST00000521715 1498 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
SYNE4Q8N205 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE4Q8N205 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE4Q8N205 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 ZNF733P-202ENST00000444809 1573 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC011493.1-201ENST00000596753 1632 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE4Q8N205 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE4Q8N205 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 RNA5SP305-201ENST00000362665 119 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AL109941.1-201ENST00000401925 229 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 SSR1P2-201ENST00000415208 787 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 AL807761.1-201ENST00000417622 171 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 SRSF1P1-201ENST00000424058 520 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 PRUNEP1-201ENST00000425846 705 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 PA2G4P6-201ENST00000438325 1197 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 RAD1P2-201ENST00000446414 663 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC105399.1-202ENST00000447303 205 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC025181.1-201ENST00000477507 416 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC079080.1-201ENST00000479841 822 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC110775.1-201ENST00000513721 462 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AL671862.1-201ENST00000515851 349 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 RNU6-964P-201ENST00000516524 69 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AP000676.2-201ENST00000529711 301 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 CR383656.6-201ENST00000550518 394 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AP003485.1-201ENST00000625093 753 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE4Q8N205 AL512283.1-201ENST00000606756 1384 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 MTCO1P4-201ENST00000520516 1409 ntBASIC6.91□□□□□ -1.3
SYNE4Q8N205 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE4Q8N205 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE4Q8N205 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
SYNE4Q8N205 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC6.91□□□□□ -1.3
SYNE4Q8N205 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE4Q8N205 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE4Q8N205 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 CNOT1-216ENST00000569240 7660 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE4Q8N205 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE4Q8N205 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC009220.1-201ENST00000451614 275 ntBASIC6.9□□□□□ -1.3
SYNE4Q8N205 RSU1P1-201ENST00000453416 441 ntBASIC6.9□□□□□ -1.3
SYNE4Q8N205 AZGP1P2-201ENST00000454506 345 ntBASIC6.9□□□□□ -1.3
SYNE4Q8N205 GYG1P1-201ENST00000460864 698 ntBASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC093267.1-201ENST00000489176 961 ntBASIC6.9□□□□□ -1.3
SYNE4Q8N205 AC082651.2-201ENST00000496833 166 ntBASIC6.9□□□□□ -1.3
SYNE4Q8N205 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.9□□□□□ -1.3
SYNE4Q8N205 MORF4L2P1-201ENST00000503761 858 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 104.7 ms