Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 OR51M1-203ENST00000642046 4092 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
ATG4DQ86TL0 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4DQ86TL0 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4DQ86TL0 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
ATG4DQ86TL0 MDGA2-203ENST00000426342 2871 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
ATG4DQ86TL0 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 LEO1-201ENST00000299601 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 TTC39DP-201ENST00000416781 1688 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 MRRFP1-201ENST00000435941 1675 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 CEACAM20-205ENST00000620096 1494 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 RNA5SP114-201ENST00000363780 113 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 RN7SKP47-201ENST00000365347 328 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL359715.1-201ENST00000404330 555 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 RN7SKP148-201ENST00000410179 275 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 RNU2-17P-201ENST00000410290 190 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL157932.1-201ENST00000413246 363 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC096644.3-201ENST00000416788 338 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 MTND2P23-201ENST00000422990 651 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL591178.2-201ENST00000429191 461 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 PHB2P1-201ENST00000434943 890 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 BX322784.1-201ENST00000455793 1077 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 MED28P7-201ENST00000456611 530 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL133480.2-201ENST00000456723 487 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 RPS3AP17-201ENST00000472594 777 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC079841.1-201ENST00000481228 950 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 RN7SL705P-201ENST00000481678 294 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 RPL21P42-201ENST00000488408 464 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC021087.2-201ENST00000504656 1203 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AK4P6-201ENST00000505168 528 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC008868.1-201ENST00000509786 737 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC016813.1-201ENST00000521511 735 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC022690.1-201ENST00000526681 550 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 FAM92A1P1-201ENST00000528023 890 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 NQO1-205ENST00000561500 891 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL390816.3-201ENST00000604527 1066 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL121782.1-201ENST00000611242 413 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC131902.3-201ENST00000611767 581 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AP005212.3-201ENST00000619964 528 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC112487.2-201ENST00000637950 304 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AP002800.1-201ENST00000624982 2225 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AC107980.1-201ENST00000558671 3355 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 ASNSP6-201ENST00000592770 1618 ntBASIC6.31□□□□□ -1.4
ATG4DQ86TL0 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4DQ86TL0 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 VN2R1P-201ENST00000449668 1743 ntBASIC6.3□□□□□ -1.4
ATG4DQ86TL0 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ATG4DQ86TL0 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms