Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC090071.1-201ENST00000507713 644 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC024451.1-201ENST00000508013 779 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AL157394.1-201ENST00000562983 1224 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC009852.1-201ENST00000564058 465 ntTSL 3 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 CTSLP2-201ENST00000580501 394 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 DUXAP4-201ENST00000603046 613 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC015871.2-201ENST00000603605 948 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC111186.1-201ENST00000604684 130 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 OR51C1P-201ENST00000608504 942 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC093635.1-201ENST00000609028 555 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 MIR4278-201ENST00000636094 69 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 B4GALT4-207ENST00000467604 5794 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 LINC01568-201ENST00000554640 2544 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 SLC25A12-202ENST00000422440 2979 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 AC104966.1-201ENST00000467010 1464 ntBASIC8.56□□□□□ -1.04
RC3H1Q5TC82 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 LINC01697-202ENST00000426534 1764 ntTSL 2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC8.56□□□□□ -1.04
RC3H1Q5TC82 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC007382.1-201ENST00000624376 2618 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 LINC00964-202ENST00000510897 3534 ntTSL 1 (best) BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 Y_RNA.450-201ENST00000384198 113 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 Y_RNA.453-201ENST00000384223 109 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 RNU6-348P-201ENST00000384386 107 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 RN7SKP285-201ENST00000410137 318 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 HSD17B7P1-201ENST00000412419 1017 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 MTND2P23-201ENST00000422990 651 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 GSTA6P-201ENST00000424144 582 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 Z99127.3-201ENST00000448158 395 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 RPSAP37-201ENST00000470913 821 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 IGBP1P5-201ENST00000507524 1000 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 PTGES3P3-201ENST00000511479 482 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 RN7SKP298-201ENST00000515950 94 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 RNU6-1045P-201ENST00000516321 107 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 ZNF706-212ENST00000520984 782 ntAPPRIS P1 TSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 CFAP54-202ENST00000524981 9766 ntAPPRIS P2 TSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AL391840.1-201ENST00000571144 367 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 MTCO1P40-201ENST00000574371 625 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC004805.3-201ENST00000603178 310 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC073137.1-201ENST00000605636 634 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 BX323046.1-201ENST00000610145 535 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AL136097.3-201ENST00000611097 505 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 MIR6729-201ENST00000618194 65 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 AC025048.6-202ENST00000627667 438 ntBASIC8.55□□□□□ -1.04
RC3H1Q5TC82 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 SLFN13-209ENST00000533791 4121 ntAPPRIS P1 TSL 2 BASIC8.55□□□□□ -1.04
RC3H1Q5TC82 ZNF160-208ENST00000599056 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.55□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms