Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AC068305.2-201ENST00000550567 1205 ntBASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AC007956.1-201ENST00000555623 542 ntBASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AGGF1P5-201ENST00000567900 919 ntBASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AP000919.1-202ENST00000581139 1264 ntBASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AP001160.4-201ENST00000596971 382 ntBASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AC009120.7-201ENST00000623452 780 ntBASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AC073488.3-201ENST00000631611 778 ntBASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AC079298.1-201ENST00000625026 1619 ntBASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PTCHD3Q3KNS1 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 THAP12P9-201ENST00000503971 2360 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC091305.2-201ENST00000624049 1576 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 RNU5B-4P-201ENST00000363508 111 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 SUGT1P2-201ENST00000379452 992 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 RNU6-31P-201ENST00000384388 108 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 RNU6-796P-201ENST00000391086 107 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 SNORA79B-201ENST00000410557 148 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 FO393414.1-201ENST00000428697 1184 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 RSU1P1-201ENST00000453416 441 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC104164.1-201ENST00000460282 590 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 RPL21P18-201ENST00000469899 480 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 PRELID3BP5-201ENST00000508612 460 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 RFPL4AP3-201ENST00000515267 345 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 RN7SKP288-201ENST00000516227 268 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC060775.1-201ENST00000518241 520 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AP000916.1-201ENST00000533869 835 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 OR8K4P-201ENST00000534608 872 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 HNRNPCP1-201ENST00000556181 766 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AL022067.1-201ENST00000602426 454 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC245014.3-201ENST00000618589 347 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 Z99129.2-201ENST00000619967 314 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC129778.1-202ENST00000623812 261 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC092159.4-201ENST00000624944 550 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC136428.4-201ENST00000634254 1155 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AL591379.1-207ENST00000635982 261 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AC008691.1-209ENST00000642094 814 ntBASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
PTCHD3Q3KNS1 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms