Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX4Q33E94 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.01□□□□□ -1.61
RFX4Q33E94 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 NANOGP4-201ENST00000427230 913 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 BX323845.3-201ENST00000428215 527 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 HMGB3P24-201ENST00000433260 622 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.01□□□□□ -1.61
RFX4Q33E94 AC013410.1-201ENST00000436223 1232 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX4Q33E94 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 NENFP3-201ENST00000503735 313 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.01□□□□□ -1.61
RFX4Q33E94 AC025458.1-201ENST00000506046 166 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.01□□□□□ -1.61
RFX4Q33E94 Vault.2-201ENST00000516519 98 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AC027369.2-201ENST00000528030 440 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.01□□□□□ -1.61
RFX4Q33E94 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.01□□□□□ -1.61
RFX4Q33E94 OR11H3P-201ENST00000554547 982 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RFX4Q33E94 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.01□□□□□ -1.61
RFX4Q33E94 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.01□□□□□ -1.61
RFX4Q33E94 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC5.01□□□□□ -1.61
RFX4Q33E94 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC5.01□□□□□ -1.61
RFX4Q33E94 RN7SL435P-201ENST00000584418 282 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX4Q33E94 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
RFX4Q33E94 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.01□□□□□ -1.61
RFX4Q33E94 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.01□□□□□ -1.61
RFX4Q33E94 MIR7109-201ENST00000613748 65 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 BX005214.3-202ENST00000619809 325 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AC010809.3-201ENST00000621310 641 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AC135068.5-201ENST00000624197 983 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 OR8G3P-202ENST00000641572 1255 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 AC073869.10-201ENST00000642016 354 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.01□□□□□ -1.61
RFX4Q33E94 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.01□□□□□ -1.61
RFX4Q33E94 AC104260.2-201ENST00000623551 3497 ntBASIC5.01□□□□□ -1.61
RFX4Q33E94 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.01□□□□□ -1.61
RFX4Q33E94 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFX4Q33E94 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
RFX4Q33E94 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 AC007342.5-201ENST00000571340 2142 ntBASIC5□□□□□ -1.61
RFX4Q33E94 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5□□□□□ -1.61
RFX4Q33E94 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 AL450345.1-202ENST00000605741 3881 ntBASIC5□□□□□ -1.61
RFX4Q33E94 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
RFX4Q33E94 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 SNORA64.1-201ENST00000362600 132 ntBASIC5□□□□□ -1.61
RFX4Q33E94 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 OR7E101P-201ENST00000400428 513 ntBASIC5□□□□□ -1.61
RFX4Q33E94 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5□□□□□ -1.61
RFX4Q33E94 AC006335.2-201ENST00000437993 330 ntBASIC5□□□□□ -1.61
RFX4Q33E94 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5□□□□□ -1.61
RFX4Q33E94 SEPT7P3-201ENST00000455017 621 ntBASIC5□□□□□ -1.61
RFX4Q33E94 TPT1P1-201ENST00000458495 518 ntBASIC5□□□□□ -1.61
RFX4Q33E94 RNA5SP103-201ENST00000459503 118 ntBASIC5□□□□□ -1.61
RFX4Q33E94 AC087672.1-201ENST00000479876 766 ntBASIC5□□□□□ -1.61
RFX4Q33E94 RPL15P21-201ENST00000495592 567 ntBASIC5□□□□□ -1.61
RFX4Q33E94 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5□□□□□ -1.61
RFX4Q33E94 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5□□□□□ -1.61
RFX4Q33E94 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5□□□□□ -1.61
RFX4Q33E94 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5□□□□□ -1.61
RFX4Q33E94 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5□□□□□ -1.61
RFX4Q33E94 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5□□□□□ -1.61
RFX4Q33E94 AC129778.1-202ENST00000623812 261 ntBASIC5□□□□□ -1.61
RFX4Q33E94 AL591379.1-207ENST00000635982 261 ntBASIC5□□□□□ -1.61
RFX4Q33E94 AMYH02020865.1-205ENST00000636189 261 ntBASIC5□□□□□ -1.61
RFX4Q33E94 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5□□□□□ -1.61
RFX4Q33E94 AP001642.1-201ENST00000624727 2117 ntBASIC5□□□□□ -1.61
RFX4Q33E94 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RFX4Q33E94 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFX4Q33E94 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5□□□□□ -1.61
RFX4Q33E94 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX4Q33E94 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.99□□□□□ -1.61
RFX4Q33E94 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.99□□□□□ -1.61
RFX4Q33E94 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFX4Q33E94 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFX4Q33E94 SUGT1P2-201ENST00000379452 992 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RFX4Q33E94 AC004386.1-201ENST00000393214 761 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.99□□□□□ -1.61
RFX4Q33E94 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.99□□□□□ -1.61
RFX4Q33E94 HSPE1P16-201ENST00000426640 348 ntBASIC4.99□□□□□ -1.61
RFX4Q33E94 RPL34P6-201ENST00000432390 345 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 122.2 ms