| FOXC1 | Q12948 | AC103563.5-201 | ENST00000455643 | 364 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | FOXP1-AS1-201 | ENST00000465742 | 700 nt | TSL 1 (best) BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | APOBEC3AP1-201 | ENST00000511396 | 287 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | EGFLAM-211 | ENST00000514476 | 676 nt | TSL 2 BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | MTND5P4-201 | ENST00000514978 | 288 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | APOOP3-201 | ENST00000536787 | 586 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | AC090023.1-201 | ENST00000545750 | 443 nt | TSL 3 BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | AC023310.2-201 | ENST00000553844 | 547 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | AL355097.1-201 | ENST00000555889 | 539 nt | TSL 4 BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | AC025043.1-201 | ENST00000558047 | 625 nt | TSL 2 BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | CDRT8-201 | ENST00000579752 | 467 nt | TSL 3 BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | AC010327.2-201 | ENST00000587647 | 488 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | AC010271.1-201 | ENST00000599050 | 558 nt | TSL 4 BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | AL008723.3-201 | ENST00000608926 | 449 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | AL161734.1-201 | ENST00000609720 | 557 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | AC078899.5-201 | ENST00000612475 | 178 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | UBE2E2-206 | ENST00000613545 | 282 nt | TSL 5 BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | AP004607.9-201 | ENST00000618202 | 316 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | MKKS-204 | ENST00000639674 | 192 nt | BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | CCDC15-203 | ENST00000529051 | 3924 nt | APPRIS ALT2 TSL 5 BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | SERPINA6-201 | ENST00000341584 | 1534 nt | APPRIS P1 TSL 1 (best) BASIC | 7.4 | □□□□□ -1.22 | | |
| FOXC1 | Q12948 | DEUP1-209 | ENST00000531792 | 1656 nt | TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AC025574.1-201 | ENST00000554784 | 1653 nt | BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | PCBD2-204 | ENST00000512783 | 5621 nt | APPRIS P1 TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | OR2L13-202 | ENST00000641714 | 1948 nt | APPRIS P1 BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | TXNRD1-219 | ENST00000529546 | 2018 nt | TSL 2 BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | CASP10-201 | ENST00000272879 | 2073 nt | TSL 2 BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | MAP3K7CL-202 | ENST00000339024 | 2066 nt | APPRIS P1 TSL 2 BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | MAP3K7CL-208 | ENST00000399935 | 2093 nt | APPRIS P1 TSL 2 BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | LINC01206-202 | ENST00000474045 | 2240 nt | TSL 5 BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | MAPK10-260 | ENST00000641047 | 2546 nt | BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | PIEZO2-204 | ENST00000538948 | 2671 nt | APPRIS ALT2 TSL 2 BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AP000866.1-202 | ENST00000529392 | 2792 nt | TSL 2 BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | ABCA1-202 | ENST00000374736 | 10494 nt | APPRIS P1 TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | TEP1-201 | ENST00000262715 | 10695 nt | APPRIS P1 TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | TXNRD1-208 | ENST00000525566 | 3836 nt | TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | PROM1-206 | ENST00000505450 | 4349 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | GIGYF2-201 | ENST00000373563 | 5847 nt | TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | PAIP2B-201 | ENST00000244221 | 6279 nt | APPRIS P1 TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | MGAM-208 | ENST00000549489 | 6525 nt | TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | PCDH15-230 | ENST00000617051 | 7048 nt | TSL 5 BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | SEC23IP-201 | ENST00000369075 | 7168 nt | APPRIS P1 TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | KIF1B-211 | ENST00000620295 | 8624 nt | TSL 1 (best) BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | WDR87-202 | ENST00000447313 | 9009 nt | APPRIS ALT2 TSL 2 BASIC | 7.4 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | NBPF19-206 | ENST00000621744 | 14425 nt | TSL 5 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | ZMYND8-201 | ENST00000262975 | 4139 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | KIF23-201 | ENST00000260363 | 3713 nt | APPRIS P4 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | STON2-201 | ENST00000267540 | 2977 nt | APPRIS P3 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | BCO2-201 | ENST00000357685 | 2930 nt | APPRIS P1 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | MRPL30-201 | ENST00000338148 | 2605 nt | APPRIS P1 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | SLAMF7-207 | ENST00000458602 | 2449 nt | TSL 2 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | ARL6IP5-201 | ENST00000273258 | 2101 nt | APPRIS P1 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | HEPACAM2-203 | ENST00000440868 | 2060 nt | TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | SHQ1-203 | ENST00000463369 | 2065 nt | TSL 2 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | LINC01258-201 | ENST00000512517 | 2059 nt | TSL 2 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | CDK19-203 | ENST00000413605 | 6007 nt | TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | RASSF6-201 | ENST00000307439 | 5994 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | CENPL-201 | ENST00000345664 | 1847 nt | APPRIS P1 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | MED21-201 | ENST00000282892 | 1753 nt | APPRIS P1 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | LMO7-205 | ENST00000377534 | 4896 nt | APPRIS ALT2 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | LRP6-206 | ENST00000543091 | 4774 nt | TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | CTDSPL-201 | ENST00000273179 | 4459 nt | APPRIS P4 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | ANKRD30A-205 | ENST00000611781 | 4474 nt | APPRIS ALT2 TSL 5 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | OR4Q3-201 | ENST00000331723 | 942 nt | APPRIS P1 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | Y_RNA.117-201 | ENST00000363294 | 101 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | MDM2-208 | ENST00000393410 | 732 nt | TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | RN7SKP146-201 | ENST00000410242 | 334 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | RNU6-77P-201 | ENST00000410554 | 91 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AC006150.1-201 | ENST00000412014 | 263 nt | TSL 5 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | LINC01203-201 | ENST00000419566 | 580 nt | TSL 2 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AP001324.1-201 | ENST00000428553 | 399 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | WWC3-AS1-201 | ENST00000430057 | 578 nt | TSL 3 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AL138759.1-201 | ENST00000432120 | 645 nt | TSL 2 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AL160004.2-201 | ENST00000432935 | 350 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AL033504.1-204 | ENST00000434985 | 413 nt | TSL 2 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AC093083.1-201 | ENST00000438633 | 347 nt | TSL 3 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AL157896.1-201 | ENST00000451617 | 790 nt | TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | RN7SL55P-201 | ENST00000464534 | 297 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | RPSAP48-201 | ENST00000466509 | 889 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | RPL12P20-201 | ENST00000475538 | 479 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AC078785.3-201 | ENST00000476607 | 425 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AC034234.1-202 | ENST00000508696 | 339 nt | TSL 3 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | MTCYBP40-201 | ENST00000509390 | 1135 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | RPS3A-208 | ENST00000509736 | 576 nt | TSL 2 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | CTD-2350J17.1-202 | ENST00000510456 | 360 nt | TSL 2 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | RNU6-1143P-201 | ENST00000516125 | 104 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | SNORA48.10-201 | ENST00000516965 | 160 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | IGHVII-60-1-201 | ENST00000519079 | 256 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AC018616.1-201 | ENST00000524085 | 546 nt | TSL 5 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AAMDC-203 | ENST00000525034 | 511 nt | TSL 3 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AP002812.4-201 | ENST00000532139 | 286 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AC013828.2-201 | ENST00000532487 | 235 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | TIMM9-205 | ENST00000555404 | 430 nt | APPRIS P1 TSL 1 (best) BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AL139317.3-202 | ENST00000555689 | 528 nt | TSL 5 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AL137129.1-201 | ENST00000555937 | 720 nt | TSL 4 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AC097467.3-210 | ENST00000597939 | 705 nt | TSL 5 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AL390058.1-201 | ENST00000603834 | 629 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AL391425.1-202 | ENST00000617518 | 774 nt | TSL 5 BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AC009318.4-201 | ENST00000620496 | 486 nt | BASIC | 7.39 | □□□□□ -1.23 | | |
| FOXC1 | Q12948 | AC099654.6-201 | ENST00000636487 | 512 nt | BASIC | 7.39 | □□□□□ -1.23 | | |