Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CDC42P6-201ENST00000421246 576 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH1Q08174 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 MIR181A2HG-201ENST00000429139 662 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 NIP7P1-201ENST00000433227 512 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AL604028.2-201ENST00000437848 788 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 UBE2V1P3-201ENST00000439651 417 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 MTCO3P18-201ENST00000440206 761 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 MTND4LP16-201ENST00000440828 295 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 MTATP6P30-201ENST00000443540 664 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 DBIL5P2-201ENST00000443827 253 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AMD1P1-201ENST00000457220 922 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AC018475.1-201ENST00000478358 465 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AC079080.1-201ENST00000479841 822 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 HMGB1P44-201ENST00000508597 572 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AP003721.1-201ENST00000543907 864 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH1Q08174 OR5BK1P-201ENST00000550421 823 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 MIR4685-201ENST00000578185 69 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 FGF7P1-201ENST00000582820 288 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 LINC00906-202ENST00000587998 648 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AL589765.5-201ENST00000596133 515 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AL035417.2-201ENST00000603887 796 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AC133552.5-201ENST00000604266 540 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AC009704.2-201ENST00000618739 483 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AC004009.2-201ENST00000623016 728 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AL137058.3-201ENST00000624531 3099 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AC121761.1-201ENST00000547326 1482 ntTSL 3 BASIC6.83□□□□□ -1.32
PCDH1Q08174 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
PCDH1Q08174 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 LINC01968-202ENST00000423318 3647 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AC125238.2-201ENST00000430003 1440 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 AC106872.5-201ENST00000508856 1416 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 CBWD6-203ENST00000456520 1608 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
PCDH1Q08174 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 AL133243.4-201ENST00000623116 3109 ntBASIC6.83□□□□□ -1.32
PCDH1Q08174 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
PCDH1Q08174 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC6.83□□□□□ -1.32
PCDH1Q08174 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 KYNUP3-201ENST00000574386 1341 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AC132219.2-201ENST00000624416 2327 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 LRRC31-202ENST00000316428 2520 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDH1Q08174 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDH1Q08174 Z99496.1-201ENST00000469424 1477 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 SCGB1A1-201ENST00000278282 441 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 ADK-201ENST00000286621 1169 ntAPPRIS P4 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDH1Q08174 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDH1Q08174 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDH1Q08174 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDH1Q08174 RNU6-374P-201ENST00000364146 108 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 RNA5SP172-201ENST00000365061 118 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 RNU4-12P-201ENST00000365233 139 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
PCDH1Q08174 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDH1Q08174 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
PCDH1Q08174 RNU5A-6P-201ENST00000384136 116 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
PCDH1Q08174 RPSAP44-201ENST00000406712 884 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 RN7SKP271-201ENST00000410528 320 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH1Q08174 AL590806.1-201ENST00000415818 853 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 MTATP6P27-201ENST00000416987 621 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AC245054.1-201ENST00000420944 258 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 MTCO3P1-205ENST00000422088 832 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AC093084.1-201ENST00000424233 687 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 TRIM60P10Y-201ENST00000425589 751 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AF274573.1-201ENST00000430535 494 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 TRIM60P8Y-201ENST00000436338 762 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 CR391992.1-201ENST00000438601 394 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AC019185.3-201ENST00000438805 323 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 ARL5AP2-201ENST00000444698 533 ntBASIC6.82□□□□□ -1.32
PCDH1Q08174 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH1Q08174 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDH1Q08174 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms