Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC005899.6-201ENST00000620729 297 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 MIR6823-201ENST00000622118 61 ntBASIC5.11□□□□□ -1.59
SCN1BQ07699 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN1BQ07699 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN1BQ07699 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN1BQ07699 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.11□□□□□ -1.59
SCN1BQ07699 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN1BQ07699 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SCN1BQ07699 LINC01613-201ENST00000561476 2780 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN1BQ07699 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN1BQ07699 AL022322.2-201ENST00000624072 20397 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 OR9K1P-201ENST00000326513 941 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN1BQ07699 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SCN1BQ07699 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SCN1BQ07699 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SCN1BQ07699 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN1BQ07699 SNRPEP6-201ENST00000407465 277 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.1□□□□□ -1.59
SCN1BQ07699 TCP1P3-201ENST00000414406 1498 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 VN1R21P-201ENST00000426703 765 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.1□□□□□ -1.59
SCN1BQ07699 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.1□□□□□ -1.59
SCN1BQ07699 ZNF619P1-201ENST00000446539 752 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AC097359.1-201ENST00000447946 463 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 MTND2P25-201ENST00000449028 610 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 SNORD125-201ENST00000459538 96 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 RN7SL72P-201ENST00000460697 269 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.1□□□□□ -1.59
SCN1BQ07699 PFN1P6-201ENST00000476786 399 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AC083795.1-201ENST00000491760 320 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AL049874.2-201ENST00000492636 288 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.1□□□□□ -1.59
SCN1BQ07699 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SCN1BQ07699 HMGN1P16-201ENST00000508308 283 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.1□□□□□ -1.59
SCN1BQ07699 RNA5SP441-201ENST00000516809 88 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 SEPT10P1-201ENST00000517342 1162 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.1□□□□□ -1.59
SCN1BQ07699 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.1□□□□□ -1.59
SCN1BQ07699 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.1□□□□□ -1.59
SCN1BQ07699 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AC068993.1-201ENST00000546724 589 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AC084759.1-201ENST00000561168 290 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AC093849.1-201ENST00000563631 2209 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AC021483.2-201ENST00000567415 758 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AC022884.3-201ENST00000579571 248 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 MIR4472-2-201ENST00000582069 67 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.1□□□□□ -1.59
SCN1BQ07699 SS18L2P2-201ENST00000583960 235 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 MIR7853-201ENST00000584820 132 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.1□□□□□ -1.59
SCN1BQ07699 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AL049844.2-201ENST00000604280 628 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AC010632.3-201ENST00000611377 369 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AP002967.1-201ENST00000624203 539 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AP003497.2-201ENST00000624220 967 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 HPVC1-201ENST00000629899 1198 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 AC010325.3-201ENST00000641084 394 ntBASIC5.1□□□□□ -1.59
SCN1BQ07699 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SCN1BQ07699 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SCN1BQ07699 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SCN1BQ07699 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.1□□□□□ -1.59
SCN1BQ07699 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
SCN1BQ07699 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN1BQ07699 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.09□□□□□ -1.59
SCN1BQ07699 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
SCN1BQ07699 AC073136.1-201ENST00000449426 2884 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
SCN1BQ07699 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN1BQ07699 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.09□□□□□ -1.59
SCN1BQ07699 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
SCN1BQ07699 RN7SKP184-201ENST00000362348 333 ntBASIC5.09□□□□□ -1.59
SCN1BQ07699 RNU1-134P-201ENST00000362935 165 ntBASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms