Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC020978.7-201ENST00000575953 1187 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGCS1Q01581 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCS1Q01581 AC007683.2-201ENST00000624681 714 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.15□□□□□ -1.59
HMGCS1Q01581 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCS1Q01581 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCS1Q01581 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCS1Q01581 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCS1Q01581 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCS1Q01581 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.59
HMGCS1Q01581 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
HMGCS1Q01581 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.15□□□□□ -1.59
HMGCS1Q01581 AC125336.1-201ENST00000508893 2827 ntBASIC5.15□□□□□ -1.59
HMGCS1Q01581 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC004158.1-201ENST00000564508 4319 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS1Q01581 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS1Q01581 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS1Q01581 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS1Q01581 OR9G4-201ENST00000302957 984 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 RNU1-19P-201ENST00000363306 165 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 AL133388.1-201ENST00000404509 287 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 RN7SKP293-201ENST00000411389 296 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 RPL12P9-201ENST00000412942 488 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS1Q01581 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC058823.1-201ENST00000485315 474 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 HMGB1P44-201ENST00000508597 572 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC027544.3-201ENST00000535082 757 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 NMNAT1P5-201ENST00000559657 841 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 FO393422.1-201ENST00000603908 708 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 AC109583.2-201ENST00000617367 129 ntBASIC5.14□□□□□ -1.59
HMGCS1Q01581 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS1Q01581 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS1Q01581 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS1Q01581 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.14□□□□□ -1.59
HMGCS1Q01581 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
HMGCS1Q01581 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 PROS2P-201ENST00000474651 1951 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS1Q01581 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS1Q01581 SNORA48.4-201ENST00000391089 134 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 OR4K12P-201ENST00000406538 961 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 Z93019.1-201ENST00000416450 973 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC124944.2-201ENST00000429866 1242 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 AL390119.1-201ENST00000440329 312 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 AL391987.1-201ENST00000441025 200 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 CYCSP51-201ENST00000443545 318 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC073909.1-201ENST00000447112 999 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC105399.1-202ENST00000447303 205 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC023141.9-201ENST00000458734 412 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC090602.1-201ENST00000469695 252 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 RN7SL717P-201ENST00000478343 297 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC016559.2-201ENST00000510759 359 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC098976.1-201ENST00000513014 541 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC027369.5-201ENST00000533838 755 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC090286.3-201ENST00000573133 187 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC012146.2-201ENST00000576545 416 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 MTCYBP13-201ENST00000578634 1093 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 PRPF19P1-201ENST00000584766 898 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
HMGCS1Q01581 AC092944.2-201ENST00000605443 889 ntBASIC5.13□□□□□ -1.59
HMGCS1Q01581 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms