Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
PRKDCP78527 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
PRKDCP78527 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PRKDCP78527 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PRKDCP78527 MIR372-201ENST00000362225 67 ntBASIC3.63□□□□□ -1.83
PRKDCP78527 SNORA48.4-201ENST00000391089 134 ntBASIC3.63□□□□□ -1.83
PRKDCP78527 U3.35-201ENST00000408405 208 ntBASIC3.63□□□□□ -1.83
PRKDCP78527 AC114814.2-201ENST00000419195 485 ntBASIC3.63□□□□□ -1.83
PRKDCP78527 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.63□□□□□ -1.83
PRKDCP78527 NUTF2P3-201ENST00000448540 384 ntBASIC3.63□□□□□ -1.83
PRKDCP78527 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC3.63□□□□□ -1.83
PRKDCP78527 SLC25A51P1-201ENST00000468432 871 ntBASIC3.63□□□□□ -1.83
PRKDCP78527 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC3.63□□□□□ -1.83
PRKDCP78527 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC3.63□□□□□ -1.83
PRKDCP78527 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PRKDCP78527 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
PRKDCP78527 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.62□□□□□ -1.83
PRKDCP78527 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKDCP78527 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 ERG-204ENST00000398907 4809 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKDCP78527 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PRKDCP78527 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC3.62□□□□□ -1.83
PRKDCP78527 RNU1-136P-201ENST00000384181 164 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 RNA5SP372-201ENST00000390836 115 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 IL6-206ENST00000407492 926 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKDCP78527 OR8G2P-201ENST00000412796 908 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AC097523.2-201ENST00000435551 652 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 YWHAZP2-201ENST00000440317 728 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AC104971.1-201ENST00000495117 578 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKDCP78527 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
PRKDCP78527 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKDCP78527 OR2BH1P-201ENST00000608850 864 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC3.62□□□□□ -1.83
PRKDCP78527 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PRKDCP78527 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 PTPRG-AS1-204ENST00000474795 2661 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 PBRM1-206ENST00000409114 5015 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC3.62□□□□□ -1.83
PRKDCP78527 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PRKDCP78527 AL353626.3-201ENST00000413399 657 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC3.62□□□□□ -1.83
PRKDCP78527 RIMKLBP2-201ENST00000424737 654 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AK3P5-201ENST00000432033 519 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.62□□□□□ -1.83
PRKDCP78527 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKDCP78527 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKDCP78527 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKDCP78527 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 SVOP-205ENST00000610966 6813 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 RASSF2-202ENST00000379400 5427 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 AC233968.1-201ENST00000611212 1300 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PRKDCP78527 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AC007568.1-201ENST00000422912 471 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AL117339.2-201ENST00000430475 180 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AC000111.2-201ENST00000448200 210 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AC090589.1-201ENST00000473109 362 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKDCP78527 NPM1P6-201ENST00000521088 871 ntBASIC3.62□□□□□ -1.83
PRKDCP78527 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKDCP78527 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.62□□□□□ -1.83
PRKDCP78527 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC3.62□□□□□ -1.83
PRKDCP78527 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.62□□□□□ -1.83
PRKDCP78527 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC3.62□□□□□ -1.83
PRKDCP78527 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
PRKDCP78527 KIAA1549L-201ENST00000265654 4492 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
PRKDCP78527 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC3.62□□□□□ -1.83
PRKDCP78527 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRKDCP78527 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRKDCP78527 ZNF626-203ENST00000601440 5963 ntTSL 4 BASIC3.61□□□□□ -1.83
PRKDCP78527 OR4F13P-202ENST00000560066 2054 ntBASIC3.61□□□□□ -1.83
PRKDCP78527 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRKDCP78527 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC3.61□□□□□ -1.83
PRKDCP78527 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.61□□□□□ -1.83
PRKDCP78527 AC007562.1-201ENST00000421819 517 ntBASIC3.61□□□□□ -1.83
PRKDCP78527 RPL34P27-201ENST00000428810 349 ntBASIC3.61□□□□□ -1.83
PRKDCP78527 AL132765.1-201ENST00000434165 553 ntBASIC3.61□□□□□ -1.83
PRKDCP78527 AC023274.2-201ENST00000445264 521 ntBASIC3.61□□□□□ -1.83
PRKDCP78527 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.61□□□□□ -1.83
PRKDCP78527 MIR492-201ENST00000638676 116 ntBASIC3.61□□□□□ -1.83
PRKDCP78527 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRKDCP78527 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRKDCP78527 KLHL3-209ENST00000508657 6981 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRKDCP78527 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKDCP78527 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
PRKDCP78527 SEL1L-201ENST00000336735 7925 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRKDCP78527 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
PRKDCP78527 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
PRKDCP78527 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC3.61□□□□□ -1.83
PRKDCP78527 STX3-208ENST00000641815 3236 ntBASIC3.61□□□□□ -1.83
PRKDCP78527 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.61□□□□□ -1.83
PRKDCP78527 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKDCP78527 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC3.61□□□□□ -1.83
PRKDCP78527 AC020779.1-201ENST00000478757 796 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms