Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC5.71□□□□□ -1.5
NKX6-1P78426 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 AL512310.3-201ENST00000547023 1335 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
NKX6-1P78426 AL353743.3-201ENST00000442109 1468 ntBASIC5.71□□□□□ -1.5
NKX6-1P78426 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NKX6-1P78426 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AL137100.1-201ENST00000556703 1620 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX6-1P78426 TYW3-201ENST00000370867 3430 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 CCR8-201ENST00000326306 1253 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 TMSB4XP2-201ENST00000335179 210 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 RNU6-543P-201ENST00000362576 108 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 SNORA62.2-201ENST00000364672 152 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 MRPS6P2-201ENST00000381143 370 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 U3.52-201ENST00000384034 216 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 MTND4P13-201ENST00000402078 1023 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 MRPS21P5-201ENST00000417885 231 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX6-1P78426 RPL12P16-201ENST00000431098 498 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX6-1P78426 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX6-1P78426 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC5.7□□□□□ -1.5
NKX6-1P78426 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AC112492.1-201ENST00000449607 712 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AL133351.3-201ENST00000454998 193 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 RPL23AP44-201ENST00000482216 473 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AC011037.1-201ENST00000483964 558 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 RN7SL561P-201ENST00000488553 281 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 RPL24-206ENST00000495401 478 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AC104109.1-201ENST00000498563 436 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AC091860.1-201ENST00000505723 432 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX6-1P78426 SCARNA5-201ENST00000516201 276 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AC084337.1-201ENST00000524809 686 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.7□□□□□ -1.5
NKX6-1P78426 NPIPB14P-203ENST00000532298 987 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AC090592.1-202ENST00000533049 568 ntTSL 4 BASIC5.7□□□□□ -1.5
NKX6-1P78426 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX6-1P78426 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX6-1P78426 HMGN2P47-201ENST00000559378 272 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AC002519.2-203ENST00000567043 837 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 MTND4LP24-201ENST00000572277 291 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 SYPL1P2-201ENST00000582878 727 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX6-1P78426 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.7□□□□□ -1.5
NKX6-1P78426 FAM72A-208ENST00000607379 1139 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AP003497.2-201ENST00000624220 967 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX6-1P78426 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX6-1P78426 ZNF663P-202ENST00000641770 1131 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC5.7□□□□□ -1.5
NKX6-1P78426 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
NKX6-1P78426 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AC100871.1-201ENST00000507871 1456 ntBASIC5.7□□□□□ -1.5
NKX6-1P78426 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC5.7□□□□□ -1.5
NKX6-1P78426 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NKX6-1P78426 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
NKX6-1P78426 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.7□□□□□ -1.5
NKX6-1P78426 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 AC007485.2-201ENST00000623493 1667 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 MTND4P10-201ENST00000446199 1363 ntBASIC5.69□□□□□ -1.5
NKX6-1P78426 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NKX6-1P78426 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NKX6-1P78426 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC5.69□□□□□ -1.5
NKX6-1P78426 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
NKX6-1P78426 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NKX6-1P78426 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms