Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 PSMA2P2-201ENST00000504319 686 ntBASIC5.54□□□□□ -1.52
RAE1P78406 AC105420.1-201ENST00000504389 582 ntBASIC5.54□□□□□ -1.52
RAE1P78406 PRELID3BP5-201ENST00000508612 460 ntBASIC5.54□□□□□ -1.52
RAE1P78406 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC5.54□□□□□ -1.52
RAE1P78406 IGKV2-19-201ENST00000518132 283 ntBASIC5.54□□□□□ -1.52
RAE1P78406 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.54□□□□□ -1.52
RAE1P78406 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.54□□□□□ -1.52
RAE1P78406 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.54□□□□□ -1.52
RAE1P78406 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.54□□□□□ -1.52
RAE1P78406 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 MIR4776-2-201ENST00000580204 80 ntBASIC5.54□□□□□ -1.52
RAE1P78406 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 AC025857.2-201ENST00000602711 238 ntBASIC5.54□□□□□ -1.52
RAE1P78406 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.54□□□□□ -1.52
RAE1P78406 AC048341.3-201ENST00000619323 491 ntBASIC5.54□□□□□ -1.52
RAE1P78406 MIR6806-201ENST00000622141 64 ntBASIC5.54□□□□□ -1.52
RAE1P78406 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.54□□□□□ -1.52
RAE1P78406 AC092159.4-201ENST00000624944 550 ntBASIC5.54□□□□□ -1.52
RAE1P78406 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAE1P78406 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.54□□□□□ -1.52
RAE1P78406 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
RAE1P78406 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.54□□□□□ -1.52
RAE1P78406 AP004607.3-201ENST00000530354 3915 ntBASIC5.54□□□□□ -1.52
RAE1P78406 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 TTC41P-205ENST00000551270 3963 ntBASIC5.53□□□□□ -1.52
RAE1P78406 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RAE1P78406 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RAE1P78406 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 COX6B1P3-201ENST00000312310 260 ntBASIC5.53□□□□□ -1.52
RAE1P78406 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 RNA5SP500-201ENST00000364486 119 ntBASIC5.53□□□□□ -1.52
RAE1P78406 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 NACAP7-201ENST00000407371 609 ntBASIC5.53□□□□□ -1.52
RAE1P78406 RN7SKP29-201ENST00000410957 272 ntBASIC5.53□□□□□ -1.52
RAE1P78406 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.53□□□□□ -1.52
RAE1P78406 PCNPP4-201ENST00000414817 517 ntBASIC5.53□□□□□ -1.52
RAE1P78406 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 MTCYBP7-201ENST00000419540 1134 ntBASIC5.53□□□□□ -1.52
RAE1P78406 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 AL034379.1-201ENST00000423216 253 ntBASIC5.53□□□□□ -1.52
RAE1P78406 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 AC007679.3-201ENST00000434035 414 ntBASIC5.53□□□□□ -1.52
RAE1P78406 MTCYBP29-201ENST00000436327 1006 ntBASIC5.53□□□□□ -1.52
RAE1P78406 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 VN1R110P-201ENST00000438988 971 ntBASIC5.53□□□□□ -1.52
RAE1P78406 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 AL031313.1-201ENST00000448435 256 ntBASIC5.53□□□□□ -1.52
RAE1P78406 EXOSC3P1-201ENST00000448649 500 ntBASIC5.53□□□□□ -1.52
RAE1P78406 AC093166.3-201ENST00000448785 303 ntBASIC5.53□□□□□ -1.52
RAE1P78406 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 TPT1P1-201ENST00000458495 518 ntBASIC5.53□□□□□ -1.52
RAE1P78406 AC105384.2-201ENST00000508433 640 ntBASIC5.53□□□□□ -1.52
RAE1P78406 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.53□□□□□ -1.52
RAE1P78406 AC006530.1-201ENST00000555980 571 ntBASIC5.53□□□□□ -1.52
RAE1P78406 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 AC008507.3-201ENST00000585753 472 ntBASIC5.53□□□□□ -1.52
RAE1P78406 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.53□□□□□ -1.52
RAE1P78406 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.53□□□□□ -1.52
RAE1P78406 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
RAE1P78406 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.53□□□□□ -1.52
RAE1P78406 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms