Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 RPS23P2-201ENST00000463671 415 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 UBFD1P1-201ENST00000473259 814 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 RPS7P6-201ENST00000485777 579 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.95□□□□□ -1.46
HDAC4P56524 SNORA70.20-201ENST00000516848 126 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 AP001804.2-201ENST00000533932 910 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.95□□□□□ -1.46
HDAC4P56524 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.95□□□□□ -1.46
HDAC4P56524 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC4P56524 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.95□□□□□ -1.46
HDAC4P56524 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.95□□□□□ -1.46
HDAC4P56524 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC4P56524 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.95□□□□□ -1.46
HDAC4P56524 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.95□□□□□ -1.46
HDAC4P56524 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.95□□□□□ -1.46
HDAC4P56524 AC063977.5-201ENST00000601044 974 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.95□□□□□ -1.46
HDAC4P56524 RN7SL544P-201ENST00000617232 284 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 RN7SL763P-201ENST00000620922 284 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC4P56524 AC138965.3-201ENST00000623875 498 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 AC091305.2-201ENST00000624049 1576 ntBASIC5.95□□□□□ -1.46
HDAC4P56524 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC4P56524 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC4P56524 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC4P56524 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
HDAC4P56524 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC4P56524 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
HDAC4P56524 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC4P56524 MTND4P21-201ENST00000453886 1357 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.94□□□□□ -1.46
HDAC4P56524 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
HDAC4P56524 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC4P56524 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC4P56524 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC4P56524 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC4P56524 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC4P56524 SNORA64.1-201ENST00000362600 132 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 RNA5SP30-201ENST00000365552 115 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 OR1F12-201ENST00000402365 945 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HDAC4P56524 SEPT7P8-201ENST00000413308 775 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC4P56524 MTCO1P51-201ENST00000427672 1060 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC4P56524 HMGB3P24-201ENST00000433260 622 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 RPS15AP29-201ENST00000445539 400 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC4P56524 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC4P56524 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC4P56524 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC4P56524 AC022215.1-201ENST00000481770 362 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.94□□□□□ -1.46
HDAC4P56524 OR8K2P-201ENST00000524645 927 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.94□□□□□ -1.46
HDAC4P56524 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC4P56524 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC4P56524 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.94□□□□□ -1.46
HDAC4P56524 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC4P56524 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.94□□□□□ -1.46
HDAC4P56524 DHFRP1-201ENST00000579682 559 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.94□□□□□ -1.46
HDAC4P56524 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.94□□□□□ -1.46
HDAC4P56524 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.94□□□□□ -1.46
HDAC4P56524 AC011445.2-201ENST00000599274 173 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.94□□□□□ -1.46
HDAC4P56524 AL122125.1-201ENST00000616999 600 ntBASIC5.94□□□□□ -1.46
HDAC4P56524 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
HDAC4P56524 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC4P56524 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC4P56524 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.94□□□□□ -1.46
HDAC4P56524 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
HDAC4P56524 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
HDAC4P56524 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.94□□□□□ -1.46
HDAC4P56524 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.93□□□□□ -1.46
HDAC4P56524 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC4P56524 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.93□□□□□ -1.46
HDAC4P56524 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC4P56524 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.93□□□□□ -1.46
HDAC4P56524 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC4P56524 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.93□□□□□ -1.46
HDAC4P56524 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
HDAC4P56524 MIR375-201ENST00000362103 64 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 SNORA51.1-201ENST00000363243 140 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 AL353625.1-202ENST00000366273 571 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 AL445213.1-201ENST00000412589 747 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 EEF1B2P8-201ENST00000414101 671 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC4P56524 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.93□□□□□ -1.46
HDAC4P56524 AC017019.1-201ENST00000426129 261 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 BRWD1P3-201ENST00000428816 390 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 AL022331.1-201ENST00000429025 477 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 ZFAND6P1-201ENST00000434138 605 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 AL590762.3-201ENST00000436372 640 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 MTND4P15-201ENST00000437913 1033 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 AP000949.1-201ENST00000438328 629 ntBASIC5.93□□□□□ -1.46
HDAC4P56524 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.93□□□□□ -1.46
HDAC4P56524 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.93□□□□□ -1.46
HDAC4P56524 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HDAC4P56524 GAPDHP14-201ENST00000450472 937 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms