Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 OR9G4-201ENST00000302957 984 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.24□□□□□ -1.57
PKNOX1P55347 AC023490.2-201ENST00000359859 470 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 RPL21P67-201ENST00000402896 478 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 COX5BP7-201ENST00000414780 274 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.24□□□□□ -1.57
PKNOX1P55347 AC093155.2-201ENST00000420734 937 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.24□□□□□ -1.57
PKNOX1P55347 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.24□□□□□ -1.57
PKNOX1P55347 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 RN7SL168P-201ENST00000463821 279 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 AC021660.1-201ENST00000465006 554 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.24□□□□□ -1.57
PKNOX1P55347 USP9YP2-201ENST00000504503 1000 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.24□□□□□ -1.57
PKNOX1P55347 AC006499.4-201ENST00000510947 694 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 USP9YP1-201ENST00000513521 1002 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 SCARNA16.4-201ENST00000516956 187 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.24□□□□□ -1.57
PKNOX1P55347 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.24□□□□□ -1.57
PKNOX1P55347 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.24□□□□□ -1.57
PKNOX1P55347 AC040958.1-201ENST00000561102 201 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.24□□□□□ -1.57
PKNOX1P55347 AC009027.1-201ENST00000604510 479 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 AL118522.2-201ENST00000616045 615 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.24□□□□□ -1.57
PKNOX1P55347 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.24□□□□□ -1.57
PKNOX1P55347 AC007683.2-201ENST00000624681 714 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 HSPA8P14-201ENST00000552265 1805 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 AC019072.1-201ENST00000604535 1551 ntBASIC5.24□□□□□ -1.57
PKNOX1P55347 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
PKNOX1P55347 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
PKNOX1P55347 AC022417.1-201ENST00000624768 1303 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PKNOX1P55347 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PKNOX1P55347 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 AL603750.1-201ENST00000624216 1717 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PKNOX1P55347 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.23□□□□□ -1.57
PKNOX1P55347 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.23□□□□□ -1.57
PKNOX1P55347 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 Z95331.1-201ENST00000623075 23112 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.23□□□□□ -1.57
PKNOX1P55347 RN7SKP28-201ENST00000364770 305 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 RN7SKP153-201ENST00000365026 316 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.23□□□□□ -1.57
PKNOX1P55347 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 OR2AT2P-201ENST00000413438 905 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 EEF1B2P8-201ENST00000414101 671 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.23□□□□□ -1.57
PKNOX1P55347 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.23□□□□□ -1.57
PKNOX1P55347 RPL37P23-201ENST00000492641 294 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.23□□□□□ -1.57
PKNOX1P55347 FTH1P11-201ENST00000517577 551 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 AC100784.1-201ENST00000522790 310 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.23□□□□□ -1.57
PKNOX1P55347 AC079315.1-201ENST00000602952 623 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PKNOX1P55347 SAMMSON-227ENST00000642114 1199 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.23□□□□□ -1.57
PKNOX1P55347 AL731532.2-201ENST00000623542 1953 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
PKNOX1P55347 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
PKNOX1P55347 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.23□□□□□ -1.57
PKNOX1P55347 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
PKNOX1P55347 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.23□□□□□ -1.57
PKNOX1P55347 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PKNOX1P55347 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
PKNOX1P55347 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PKNOX1P55347 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKNOX1P55347 AC104623.2-202ENST00000623477 4002 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKNOX1P55347 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKNOX1P55347 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
PKNOX1P55347 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PKNOX1P55347 RNA5SP46-201ENST00000362370 120 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.22□□□□□ -1.57
PKNOX1P55347 HMGN1P20-201ENST00000411849 300 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 PCNPP4-201ENST00000414817 517 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 DNAJA1P5-201ENST00000440278 943 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms