Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 MT1CP-201ENST00000567054 174 ntBASIC7.32□□□□□ -1.24
USP11P51784 AC021483.2-201ENST00000567415 758 ntBASIC7.32□□□□□ -1.24
USP11P51784 AC002400.1-201ENST00000569310 726 ntBASIC7.32□□□□□ -1.24
USP11P51784 GARSP1-201ENST00000570895 719 ntBASIC7.32□□□□□ -1.24
USP11P51784 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC7.32□□□□□ -1.24
USP11P51784 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.32□□□□□ -1.24
USP11P51784 AL606834.2-201ENST00000602954 668 ntBASIC7.32□□□□□ -1.24
USP11P51784 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC7.32□□□□□ -1.24
USP11P51784 AL445423.1-201ENST00000609941 536 ntBASIC7.32□□□□□ -1.24
USP11P51784 AF246928.1-201ENST00000623768 87 ntBASIC7.32□□□□□ -1.24
USP11P51784 AL132640.3-201ENST00000630473 177 ntBASIC7.32□□□□□ -1.24
USP11P51784 OR4G1P-202ENST00000641173 1788 ntBASIC7.32□□□□□ -1.24
USP11P51784 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 LINC01613-201ENST00000561476 2780 ntBASIC7.32□□□□□ -1.24
USP11P51784 AC125238.2-201ENST00000430003 1440 ntBASIC7.32□□□□□ -1.24
USP11P51784 SEMA3A-204ENST00000436949 2550 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
USP11P51784 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.32□□□□□ -1.24
USP11P51784 AC027279.4-201ENST00000624371 2072 ntBASIC7.32□□□□□ -1.24
USP11P51784 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.32□□□□□ -1.24
USP11P51784 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
USP11P51784 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
USP11P51784 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
USP11P51784 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
USP11P51784 BTN3A2-201ENST00000356386 3017 ntAPPRIS P3 TSL 5 BASIC7.31□□□□□ -1.24
USP11P51784 AC022905.1-201ENST00000503430 3048 ntBASIC7.31□□□□□ -1.24
USP11P51784 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
USP11P51784 SNORD16-201ENST00000362803 99 ntBASIC7.31□□□□□ -1.24
USP11P51784 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC7.31□□□□□ -1.24
USP11P51784 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
USP11P51784 ST13P16-201ENST00000401760 781 ntBASIC7.31□□□□□ -1.24
USP11P51784 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.31□□□□□ -1.24
USP11P51784 CDK8P2-201ENST00000415020 547 ntBASIC7.31□□□□□ -1.24
USP11P51784 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC7.31□□□□□ -1.24
USP11P51784 AC008173.1-201ENST00000418901 264 ntBASIC7.31□□□□□ -1.24
USP11P51784 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC7.31□□□□□ -1.24
USP11P51784 SGO1P2-201ENST00000429458 1589 ntBASIC7.31□□□□□ -1.24
USP11P51784 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC7.31□□□□□ -1.24
USP11P51784 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC7.31□□□□□ -1.24
USP11P51784 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC7.31□□□□□ -1.24
USP11P51784 AC007383.1-201ENST00000445875 636 ntBASIC7.31□□□□□ -1.24
USP11P51784 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.31□□□□□ -1.24
USP11P51784 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC7.31□□□□□ -1.24
USP11P51784 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 AC005165.2-201ENST00000466070 380 ntBASIC7.31□□□□□ -1.24
USP11P51784 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC7.31□□□□□ -1.24
USP11P51784 AC044810.1-201ENST00000480271 711 ntBASIC7.31□□□□□ -1.24
USP11P51784 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.31□□□□□ -1.24
USP11P51784 RNA5SP418-201ENST00000515951 117 ntBASIC7.31□□□□□ -1.24
USP11P51784 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC7.31□□□□□ -1.24
USP11P51784 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC7.31□□□□□ -1.24
USP11P51784 BLZF2P-201ENST00000553776 1130 ntBASIC7.31□□□□□ -1.24
USP11P51784 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC7.31□□□□□ -1.24
USP11P51784 NDUFA5P11-201ENST00000567995 343 ntBASIC7.31□□□□□ -1.24
USP11P51784 AC012417.1-201ENST00000582307 1039 ntBASIC7.31□□□□□ -1.24
USP11P51784 SLC25A36P1-201ENST00000590111 465 ntBASIC7.31□□□□□ -1.24
USP11P51784 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC7.31□□□□□ -1.24
USP11P51784 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC7.31□□□□□ -1.24
USP11P51784 AC021749.1-201ENST00000604322 607 ntBASIC7.31□□□□□ -1.24
USP11P51784 WBP1LP12-201ENST00000604449 331 ntBASIC7.31□□□□□ -1.24
USP11P51784 AC073046.2-201ENST00000604756 527 ntBASIC7.31□□□□□ -1.24
USP11P51784 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC7.31□□□□□ -1.24
USP11P51784 FRG1HP-204ENST00000617940 757 ntBASIC7.31□□□□□ -1.24
USP11P51784 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 AC009878.1-201ENST00000621819 340 ntBASIC7.31□□□□□ -1.24
USP11P51784 AC063952.1-203ENST00000634410 658 ntBASIC7.31□□□□□ -1.24
USP11P51784 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
USP11P51784 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.31□□□□□ -1.24
USP11P51784 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.31□□□□□ -1.24
USP11P51784 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.31□□□□□ -1.24
USP11P51784 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
USP11P51784 AL731556.1-201ENST00000394628 3711 ntBASIC7.3□□□□□ -1.24
USP11P51784 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC7.3□□□□□ -1.24
USP11P51784 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC7.3□□□□□ -1.24
USP11P51784 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USP11P51784 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
USP11P51784 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
USP11P51784 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USP11P51784 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC7.3□□□□□ -1.24
USP11P51784 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
USP11P51784 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
USP11P51784 FAM32BP-201ENST00000344033 333 ntBASIC7.3□□□□□ -1.24
USP11P51784 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
USP11P51784 Y_RNA.578-201ENST00000390903 88 ntBASIC7.3□□□□□ -1.24
USP11P51784 MCTS2P-201ENST00000394552 546 ntBASIC7.3□□□□□ -1.24
USP11P51784 PRELID1P1-201ENST00000403549 660 ntBASIC7.3□□□□□ -1.24
USP11P51784 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms