Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RFC3P40938 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC3P40938 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC3P40938 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RFC3P40938 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC3P40938 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC3P40938 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RFC3P40938 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 RNA5SP326-201ENST00000363209 110 ntBASIC5.07□□□□□ -1.6
RFC3P40938 AC096921.1-201ENST00000411661 375 ntBASIC5.07□□□□□ -1.6
RFC3P40938 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC3P40938 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC5.07□□□□□ -1.6
RFC3P40938 BRWD1P3-201ENST00000428816 390 ntBASIC5.07□□□□□ -1.6
RFC3P40938 AL136231.1-201ENST00000429407 730 ntBASIC5.07□□□□□ -1.6
RFC3P40938 MED28P3-201ENST00000444288 531 ntBASIC5.07□□□□□ -1.6
RFC3P40938 AL163193.1-201ENST00000444895 788 ntBASIC5.07□□□□□ -1.6
RFC3P40938 AL161722.1-201ENST00000446972 1032 ntBASIC5.07□□□□□ -1.6
RFC3P40938 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.07□□□□□ -1.6
RFC3P40938 RPS4XP12-201ENST00000461747 709 ntBASIC5.07□□□□□ -1.6
RFC3P40938 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.07□□□□□ -1.6
RFC3P40938 AC023424.1-201ENST00000496058 459 ntBASIC5.07□□□□□ -1.6
RFC3P40938 AC008953.1-201ENST00000497334 318 ntBASIC5.07□□□□□ -1.6
RFC3P40938 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC3P40938 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.07□□□□□ -1.6
RFC3P40938 OR5M14P-201ENST00000506803 618 ntBASIC5.07□□□□□ -1.6
RFC3P40938 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.07□□□□□ -1.6
RFC3P40938 RNU6-513P-201ENST00000516104 104 ntBASIC5.07□□□□□ -1.6
RFC3P40938 LSM3P2-201ENST00000551246 273 ntBASIC5.07□□□□□ -1.6
RFC3P40938 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 MIR4311-201ENST00000580794 100 ntBASIC5.07□□□□□ -1.6
RFC3P40938 AC008833.1-201ENST00000611633 691 ntBASIC5.07□□□□□ -1.6
RFC3P40938 CASC19-264ENST00000641912 1184 ntBASIC5.07□□□□□ -1.6
RFC3P40938 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RFC3P40938 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
RFC3P40938 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC3P40938 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC3P40938 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RFC3P40938 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFC3P40938 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFC3P40938 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.06□□□□□ -1.6
RFC3P40938 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 AC109780.1-201ENST00000451768 1344 ntBASIC5.06□□□□□ -1.6
RFC3P40938 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC3P40938 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC3P40938 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
RFC3P40938 SNORA16A-201ENST00000384342 137 ntBASIC5.06□□□□□ -1.6
RFC3P40938 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC3P40938 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC3P40938 VN1R21P-201ENST00000426703 765 ntBASIC5.06□□□□□ -1.6
RFC3P40938 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC5.06□□□□□ -1.6
RFC3P40938 AC092106.1-201ENST00000444291 373 ntBASIC5.06□□□□□ -1.6
RFC3P40938 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC3P40938 COPS8P2-201ENST00000473228 627 ntBASIC5.06□□□□□ -1.6
RFC3P40938 RN7SL583P-201ENST00000475692 287 ntBASIC5.06□□□□□ -1.6
RFC3P40938 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC3P40938 AC138409.2-202ENST00000507274 458 ntBASIC5.06□□□□□ -1.6
RFC3P40938 HIGD1AP14-201ENST00000507617 282 ntBASIC5.06□□□□□ -1.6
RFC3P40938 AC111000.6-201ENST00000514471 709 ntBASIC5.06□□□□□ -1.6
RFC3P40938 snoU109.5-201ENST00000516231 132 ntBASIC5.06□□□□□ -1.6
RFC3P40938 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.06□□□□□ -1.6
RFC3P40938 AC126615.2-201ENST00000553003 515 ntBASIC5.06□□□□□ -1.6
RFC3P40938 AC004825.1-201ENST00000555068 586 ntBASIC5.06□□□□□ -1.6
RFC3P40938 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC3P40938 DHFRP1-201ENST00000579682 559 ntBASIC5.06□□□□□ -1.6
RFC3P40938 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC3P40938 MIR4443-201ENST00000585052 53 ntBASIC5.06□□□□□ -1.6
RFC3P40938 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC3P40938 AC006272.2-201ENST00000594725 163 ntBASIC5.06□□□□□ -1.6
RFC3P40938 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC3P40938 AC000068.2-201ENST00000608816 460 ntBASIC5.06□□□□□ -1.6
RFC3P40938 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 AC008115.4-201ENST00000619780 775 ntBASIC5.06□□□□□ -1.6
RFC3P40938 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.06□□□□□ -1.6
RFC3P40938 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.06□□□□□ -1.6
RFC3P40938 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RFC3P40938 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC3P40938 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFC3P40938 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC3P40938 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC3P40938 TCP1P3-201ENST00000414406 1498 ntBASIC5.06□□□□□ -1.6
RFC3P40938 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC3P40938 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.06□□□□□ -1.6
RFC3P40938 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.06□□□□□ -1.6
RFC3P40938 AL353796.1-201ENST00000561542 3241 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms