Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 AL596448.1-201ENST00000415024 392 ntBASIC5.38□□□□□ -1.55
RPA3P35244 AL121878.1-201ENST00000418638 859 ntBASIC5.38□□□□□ -1.55
RPA3P35244 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.38□□□□□ -1.55
RPA3P35244 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.38□□□□□ -1.55
RPA3P35244 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RPA3P35244 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.38□□□□□ -1.55
RPA3P35244 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.38□□□□□ -1.55
RPA3P35244 AC090018.1-201ENST00000434369 367 ntBASIC5.38□□□□□ -1.55
RPA3P35244 AC012512.1-201ENST00000446594 718 ntBASIC5.38□□□□□ -1.55
RPA3P35244 AL157385.1-201ENST00000446973 268 ntBASIC5.38□□□□□ -1.55
RPA3P35244 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
RPA3P35244 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.38□□□□□ -1.55
RPA3P35244 AC074087.1-201ENST00000512059 724 ntBASIC5.38□□□□□ -1.55
RPA3P35244 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.38□□□□□ -1.55
RPA3P35244 RN7SKP99-201ENST00000517028 307 ntBASIC5.38□□□□□ -1.55
RPA3P35244 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.38□□□□□ -1.55
RPA3P35244 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.38□□□□□ -1.55
RPA3P35244 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
RPA3P35244 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.38□□□□□ -1.55
RPA3P35244 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.38□□□□□ -1.55
RPA3P35244 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.38□□□□□ -1.55
RPA3P35244 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.38□□□□□ -1.55
RPA3P35244 SNORA11.6-201ENST00000619030 128 ntBASIC5.38□□□□□ -1.55
RPA3P35244 AL512356.3-201ENST00000623005 461 ntBASIC5.38□□□□□ -1.55
RPA3P35244 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.38□□□□□ -1.55
RPA3P35244 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RPA3P35244 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RPA3P35244 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RPA3P35244 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
RPA3P35244 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RPA3P35244 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.37□□□□□ -1.55
RPA3P35244 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
RPA3P35244 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.37□□□□□ -1.55
RPA3P35244 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 AC083843.2-201ENST00000568248 6253 ntBASIC5.37□□□□□ -1.55
RPA3P35244 MIR323A-201ENST00000362199 86 ntBASIC5.37□□□□□ -1.55
RPA3P35244 RN7SKP28-201ENST00000364770 305 ntBASIC5.37□□□□□ -1.55
RPA3P35244 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.37□□□□□ -1.55
RPA3P35244 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 AC124944.2-201ENST00000429866 1242 ntBASIC5.37□□□□□ -1.55
RPA3P35244 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.37□□□□□ -1.55
RPA3P35244 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.37□□□□□ -1.55
RPA3P35244 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 RN7SL273P-201ENST00000481561 299 ntBASIC5.37□□□□□ -1.55
RPA3P35244 AC023424.1-201ENST00000496058 459 ntBASIC5.37□□□□□ -1.55
RPA3P35244 RPS24P16-201ENST00000497294 392 ntBASIC5.37□□□□□ -1.55
RPA3P35244 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.37□□□□□ -1.55
RPA3P35244 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.37□□□□□ -1.55
RPA3P35244 OR5D2P-201ENST00000524390 911 ntBASIC5.37□□□□□ -1.55
RPA3P35244 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.37□□□□□ -1.55
RPA3P35244 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.37□□□□□ -1.55
RPA3P35244 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.37□□□□□ -1.55
RPA3P35244 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.37□□□□□ -1.55
RPA3P35244 AC010487.1-201ENST00000594408 1172 ntBASIC5.37□□□□□ -1.55
RPA3P35244 RNA5SP440-201ENST00000612665 119 ntBASIC5.37□□□□□ -1.55
RPA3P35244 AP003400.3-201ENST00000624904 346 ntBASIC5.37□□□□□ -1.55
RPA3P35244 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.37□□□□□ -1.55
RPA3P35244 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RPA3P35244 AP005432.1-201ENST00000580891 3485 ntBASIC5.37□□□□□ -1.55
RPA3P35244 XKRY2-202ENST00000623874 1581 ntBASIC5.37□□□□□ -1.55
RPA3P35244 XKRY-202ENST00000624960 1581 ntBASIC5.37□□□□□ -1.55
RPA3P35244 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.37□□□□□ -1.55
RPA3P35244 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.37□□□□□ -1.55
RPA3P35244 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.37□□□□□ -1.55
RPA3P35244 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPA3P35244 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RPA3P35244 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RPA3P35244 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.36□□□□□ -1.55
RPA3P35244 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RPA3P35244 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.36□□□□□ -1.55
RPA3P35244 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.36□□□□□ -1.55
RPA3P35244 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.36□□□□□ -1.55
RPA3P35244 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
RPA3P35244 RNA5SP435-201ENST00000364044 108 ntBASIC5.36□□□□□ -1.55
RPA3P35244 PCNPP4-201ENST00000414817 517 ntBASIC5.36□□□□□ -1.55
RPA3P35244 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.36□□□□□ -1.55
RPA3P35244 OR6D1P-201ENST00000436165 939 ntBASIC5.36□□□□□ -1.55
RPA3P35244 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.36□□□□□ -1.55
RPA3P35244 AC073909.1-201ENST00000447112 999 ntBASIC5.36□□□□□ -1.55
RPA3P35244 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.36□□□□□ -1.55
RPA3P35244 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.36□□□□□ -1.55
RPA3P35244 AL035090.1-201ENST00000454835 332 ntBASIC5.36□□□□□ -1.55
RPA3P35244 RN7SL717P-201ENST00000478343 297 ntBASIC5.36□□□□□ -1.55
RPA3P35244 IGLVIV-64-201ENST00000518581 301 ntBASIC5.36□□□□□ -1.55
RPA3P35244 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.36□□□□□ -1.55
RPA3P35244 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.36□□□□□ -1.55
RPA3P35244 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.36□□□□□ -1.55
RPA3P35244 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RPA3P35244 AC012616.1-201ENST00000600294 197 ntBASIC5.36□□□□□ -1.55
RPA3P35244 AC125494.2-201ENST00000602431 657 ntBASIC5.36□□□□□ -1.55
RPA3P35244 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.36□□□□□ -1.55
RPA3P35244 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms