Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 RN7SL290P-201ENST00000578661 300 ntBASIC5.77□□□□□ -1.49
CHRNA3P32297 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.77□□□□□ -1.49
CHRNA3P32297 AC002069.2-201ENST00000603580 883 ntBASIC5.77□□□□□ -1.49
CHRNA3P32297 AP000894.4-201ENST00000610185 483 ntBASIC5.77□□□□□ -1.49
CHRNA3P32297 AC007683.2-201ENST00000624681 714 ntBASIC5.77□□□□□ -1.49
CHRNA3P32297 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CHRNA3P32297 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA3P32297 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA3P32297 AC144833.1-201ENST00000567953 4089 ntBASIC5.77□□□□□ -1.49
CHRNA3P32297 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHRNA3P32297 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.77□□□□□ -1.49
CHRNA3P32297 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.76□□□□□ -1.49
CHRNA3P32297 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CHRNA3P32297 MT-RNR2-201ENST00000387347 1559 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 LINC02019-201ENST00000608605 2060 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 CDC27P2-201ENST00000425026 1922 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CHRNA3P32297 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 RN7SKP186-201ENST00000365371 303 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 RNA5SP131-201ENST00000365452 119 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 SNORA48.4-201ENST00000391089 134 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 AL358178.1-201ENST00000407698 397 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.76□□□□□ -1.49
CHRNA3P32297 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.76□□□□□ -1.49
CHRNA3P32297 RPL7AP49-201ENST00000429522 581 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 AL591438.1-201ENST00000433508 581 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 FMO7P-201ENST00000436045 768 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 AC016772.1-201ENST00000444170 1261 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
CHRNA3P32297 RNA5SP362-201ENST00000516048 118 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.76□□□□□ -1.49
CHRNA3P32297 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA3P32297 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC5.76□□□□□ -1.49
CHRNA3P32297 AL359219.2-201ENST00000555184 348 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA3P32297 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.76□□□□□ -1.49
CHRNA3P32297 QTRT1P1-201ENST00000604344 1078 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.76□□□□□ -1.49
CHRNA3P32297 AC109309.2-201ENST00000612597 332 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.76□□□□□ -1.49
CHRNA3P32297 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CHRNA3P32297 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA3P32297 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.76□□□□□ -1.49
CHRNA3P32297 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CHRNA3P32297 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.76□□□□□ -1.49
CHRNA3P32297 AL078621.3-201ENST00000623707 2042 ntBASIC5.75□□□□□ -1.49
CHRNA3P32297 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.75□□□□□ -1.49
CHRNA3P32297 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
CHRNA3P32297 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
CHRNA3P32297 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.75□□□□□ -1.49
CHRNA3P32297 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CHRNA3P32297 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.75□□□□□ -1.49
CHRNA3P32297 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.75□□□□□ -1.49
CHRNA3P32297 RPSAP35-201ENST00000413753 818 ntBASIC5.75□□□□□ -1.49
CHRNA3P32297 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.75□□□□□ -1.49
CHRNA3P32297 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.75□□□□□ -1.49
CHRNA3P32297 AC007161.1-204ENST00000423039 460 ntBASIC5.75□□□□□ -1.49
CHRNA3P32297 HMGN2P27-201ENST00000427352 270 ntBASIC5.75□□□□□ -1.49
CHRNA3P32297 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.75□□□□□ -1.49
CHRNA3P32297 OR52E3P-201ENST00000452083 936 ntBASIC5.75□□□□□ -1.49
CHRNA3P32297 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.75□□□□□ -1.49
CHRNA3P32297 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.75□□□□□ -1.49
CHRNA3P32297 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 MIR1273E-201ENST00000581165 102 ntBASIC5.75□□□□□ -1.49
CHRNA3P32297 AC108738.1-201ENST00000603703 237 ntBASIC5.75□□□□□ -1.49
CHRNA3P32297 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.75□□□□□ -1.49
CHRNA3P32297 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CHRNA3P32297 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
CHRNA3P32297 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.75□□□□□ -1.49
CHRNA3P32297 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CHRNA3P32297 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.75□□□□□ -1.49
CHRNA3P32297 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CHRNA3P32297 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
CHRNA3P32297 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHRNA3P32297 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.74□□□□□ -1.49
CHRNA3P32297 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CHRNA3P32297 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
CHRNA3P32297 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.74□□□□□ -1.49
CHRNA3P32297 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.74□□□□□ -1.49
CHRNA3P32297 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms