Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A5P29400 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.19□□□□□ -1.42
COL4A5P29400 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.19□□□□□ -1.42
COL4A5P29400 AC016745.2-201ENST00000608834 3443 ntBASIC6.19□□□□□ -1.42
COL4A5P29400 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL4A5P29400 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL4A5P29400 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A5P29400 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A5P29400 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A5P29400 RNU1-74P-201ENST00000384108 171 ntBASIC6.18□□□□□ -1.42
COL4A5P29400 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
COL4A5P29400 RSU1P3-201ENST00000412878 835 ntBASIC6.18□□□□□ -1.42
COL4A5P29400 AC012519.1-201ENST00000424588 610 ntBASIC6.18□□□□□ -1.42
COL4A5P29400 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.18□□□□□ -1.42
COL4A5P29400 AL390879.1-201ENST00000439143 386 ntBASIC6.18□□□□□ -1.42
COL4A5P29400 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.18□□□□□ -1.42
COL4A5P29400 TCEA1P1-201ENST00000449716 880 ntBASIC6.18□□□□□ -1.42
COL4A5P29400 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC6.18□□□□□ -1.42
COL4A5P29400 AC097173.1-201ENST00000505862 819 ntBASIC6.18□□□□□ -1.42
COL4A5P29400 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.18□□□□□ -1.42
COL4A5P29400 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC6.18□□□□□ -1.42
COL4A5P29400 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
COL4A5P29400 AP001880.2-201ENST00000538233 448 ntBASIC6.18□□□□□ -1.42
COL4A5P29400 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A5P29400 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A5P29400 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.18□□□□□ -1.42
COL4A5P29400 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
COL4A5P29400 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A5P29400 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A5P29400 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
COL4A5P29400 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.18□□□□□ -1.42
COL4A5P29400 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A5P29400 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.18□□□□□ -1.42
COL4A5P29400 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.18□□□□□ -1.42
COL4A5P29400 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A5P29400 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.18□□□□□ -1.42
COL4A5P29400 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A5P29400 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
COL4A5P29400 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
COL4A5P29400 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A5P29400 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A5P29400 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A5P29400 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
COL4A5P29400 SNORA77-201ENST00000408716 125 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 GTF2IP5-201ENST00000414608 731 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A5P29400 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A5P29400 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC6.17□□□□□ -1.42
COL4A5P29400 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A5P29400 AC010733.1-201ENST00000451515 401 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 AC020779.1-201ENST00000478757 796 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 RN7SL814P-201ENST00000487715 300 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 AC025674.1-201ENST00000507074 324 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 RN7SKP122-201ENST00000515923 296 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A5P29400 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A5P29400 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A5P29400 RNF138P2-201ENST00000603490 592 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 AC020910.3-201ENST00000603701 874 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 AL590392.1-201ENST00000604960 446 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 SSX9-202ENST00000608568 580 ntTSL 4 BASIC6.17□□□□□ -1.42
COL4A5P29400 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A5P29400 AC010401.2-201ENST00000575137 4934 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A5P29400 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A5P29400 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
COL4A5P29400 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COL4A5P29400 AC079097.1-201ENST00000512187 1399 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A5P29400 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A5P29400 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A5P29400 STXBP5-201ENST00000321680 3456 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
COL4A5P29400 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A5P29400 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
COL4A5P29400 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A5P29400 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COL4A5P29400 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A5P29400 AC009480.2-201ENST00000422916 432 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 AC124944.2-201ENST00000429866 1242 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 AC073465.2-201ENST00000440938 498 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A5P29400 AL356390.1-201ENST00000455684 397 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 OR52A4P-201ENST00000472867 958 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 RPL7P41-201ENST00000485823 957 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.17□□□□□ -1.42
COL4A5P29400 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.17□□□□□ -1.42
COL4A5P29400 AC019193.2-201ENST00000610012 634 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 AL359757.1-201ENST00000623176 255 ntBASIC6.17□□□□□ -1.42
COL4A5P29400 METTL21EP-202ENST00000605100 2312 ntTSL 2 BASIC6.17□□□□□ -1.42
COL4A5P29400 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COL4A5P29400 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COL4A5P29400 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.16□□□□□ -1.42
COL4A5P29400 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC6.16□□□□□ -1.42
COL4A5P29400 ANK2-203ENST00000394537 6313 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A5P29400 MAPK10-270ENST00000641102 3538 ntBASIC6.16□□□□□ -1.42
COL4A5P29400 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A5P29400 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.16□□□□□ -1.42
COL4A5P29400 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A5P29400 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
COL4A5P29400 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms