Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MYL6-213ENST00000549017 502 ntTSL 3 BASIC6.15□□□□□ -1.42
BDNFP23560 AL049870.4-201ENST00000555741 486 ntBASIC6.15□□□□□ -1.42
BDNFP23560 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.15□□□□□ -1.42
BDNFP23560 AC068714.1-201ENST00000559623 800 ntBASIC6.15□□□□□ -1.42
BDNFP23560 AC007346.2-201ENST00000564816 892 ntBASIC6.15□□□□□ -1.42
BDNFP23560 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
BDNFP23560 AC123786.2-201ENST00000603459 275 ntBASIC6.15□□□□□ -1.42
BDNFP23560 RN7SL544P-201ENST00000617232 284 ntBASIC6.15□□□□□ -1.42
BDNFP23560 AL355974.3-201ENST00000617383 467 ntBASIC6.15□□□□□ -1.42
BDNFP23560 RN7SL763P-201ENST00000620922 284 ntBASIC6.15□□□□□ -1.42
BDNFP23560 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.15□□□□□ -1.42
BDNFP23560 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC6.15□□□□□ -1.43
BDNFP23560 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
BDNFP23560 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
BDNFP23560 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
BDNFP23560 AP004607.3-201ENST00000530354 3915 ntBASIC6.15□□□□□ -1.43
BDNFP23560 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.15□□□□□ -1.43
BDNFP23560 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
BDNFP23560 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.15□□□□□ -1.43
BDNFP23560 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.14□□□□□ -1.43
BDNFP23560 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
BDNFP23560 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
BDNFP23560 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 AC015799.1-201ENST00000622996 3122 ntBASIC6.14□□□□□ -1.43
BDNFP23560 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 CHMP1B2P-201ENST00000399581 597 ntBASIC6.14□□□□□ -1.43
BDNFP23560 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
BDNFP23560 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.14□□□□□ -1.43
BDNFP23560 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.14□□□□□ -1.43
BDNFP23560 AL357752.1-201ENST00000412817 349 ntBASIC6.14□□□□□ -1.43
BDNFP23560 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.14□□□□□ -1.43
BDNFP23560 AL590609.2-201ENST00000421430 368 ntBASIC6.14□□□□□ -1.43
BDNFP23560 AC099336.2-201ENST00000422457 254 ntBASIC6.14□□□□□ -1.43
BDNFP23560 NPM1P22-201ENST00000427761 952 ntBASIC6.14□□□□□ -1.43
BDNFP23560 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.14□□□□□ -1.43
BDNFP23560 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.14□□□□□ -1.43
BDNFP23560 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC6.14□□□□□ -1.43
BDNFP23560 AC099560.2-201ENST00000457554 255 ntBASIC6.14□□□□□ -1.43
BDNFP23560 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.14□□□□□ -1.43
BDNFP23560 RPS17P15-201ENST00000475609 349 ntBASIC6.14□□□□□ -1.43
BDNFP23560 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.14□□□□□ -1.43
BDNFP23560 AC093890.1-201ENST00000502554 540 ntBASIC6.14□□□□□ -1.43
BDNFP23560 CDH12P2-201ENST00000504393 298 ntBASIC6.14□□□□□ -1.43
BDNFP23560 SCARNA6.1-201ENST00000516989 238 ntBASIC6.14□□□□□ -1.43
BDNFP23560 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.14□□□□□ -1.43
BDNFP23560 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
BDNFP23560 OR10D4P-201ENST00000525892 951 ntBASIC6.14□□□□□ -1.43
BDNFP23560 AC020978.7-201ENST00000575953 1187 ntBASIC6.14□□□□□ -1.43
BDNFP23560 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.14□□□□□ -1.43
BDNFP23560 MIR4260-201ENST00000583107 67 ntBASIC6.14□□□□□ -1.43
BDNFP23560 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.14□□□□□ -1.43
BDNFP23560 AC079791.1-201ENST00000605356 973 ntBASIC6.14□□□□□ -1.43
BDNFP23560 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.14□□□□□ -1.43
BDNFP23560 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC6.14□□□□□ -1.43
BDNFP23560 TMEM30CP-203ENST00000637814 1035 ntBASIC6.14□□□□□ -1.43
BDNFP23560 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
BDNFP23560 AC087565.3-203ENST00000641018 837 ntBASIC6.14□□□□□ -1.43
BDNFP23560 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
BDNFP23560 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
BDNFP23560 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.14□□□□□ -1.43
BDNFP23560 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BDNFP23560 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.14□□□□□ -1.43
BDNFP23560 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
BDNFP23560 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.14□□□□□ -1.43
BDNFP23560 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BDNFP23560 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BDNFP23560 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BDNFP23560 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.13□□□□□ -1.43
BDNFP23560 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BDNFP23560 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BDNFP23560 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BDNFP23560 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.13□□□□□ -1.43
BDNFP23560 PWAR1-201ENST00000624188 2414 ntBASIC6.13□□□□□ -1.43
BDNFP23560 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
BDNFP23560 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BDNFP23560 RNA5-8SP5-201ENST00000365304 152 ntBASIC6.13□□□□□ -1.43
BDNFP23560 MIR323B-201ENST00000385269 82 ntBASIC6.13□□□□□ -1.43
BDNFP23560 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.13□□□□□ -1.43
BDNFP23560 CHEK2P5-201ENST00000423877 246 ntBASIC6.13□□□□□ -1.43
BDNFP23560 AL365220.1-201ENST00000432923 399 ntBASIC6.13□□□□□ -1.43
BDNFP23560 GAPDHP48-201ENST00000436626 961 ntBASIC6.13□□□□□ -1.43
BDNFP23560 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.13□□□□□ -1.43
BDNFP23560 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.13□□□□□ -1.43
BDNFP23560 YWHAEP1-201ENST00000453697 763 ntBASIC6.13□□□□□ -1.43
BDNFP23560 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.13□□□□□ -1.43
BDNFP23560 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms