Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 MTCO3P24-201ENST00000572729 782 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.77□□□□□ -1.17
RFX1P22670 AC010463.3-201ENST00000594077 500 ntBASIC7.77□□□□□ -1.17
RFX1P22670 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 AL109618.2-201ENST00000605527 211 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AC024560.3-201ENST00000608482 349 ntBASIC7.77□□□□□ -1.17
RFX1P22670 AC061709.1-202ENST00000615029 527 ntTSL 3 BASIC7.77□□□□□ -1.17
RFX1P22670 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.77□□□□□ -1.17
RFX1P22670 AL008636.1-201ENST00000625038 1018 ntBASIC7.77□□□□□ -1.17
RFX1P22670 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.77□□□□□ -1.17
RFX1P22670 AC244258.1-201ENST00000637553 1071 ntBASIC7.77□□□□□ -1.17
RFX1P22670 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.77□□□□□ -1.17
RFX1P22670 AC004023.1-201ENST00000561473 1744 ntBASIC7.77□□□□□ -1.17
RFX1P22670 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC7.77□□□□□ -1.17
RFX1P22670 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 AC121758.1-201ENST00000557452 3942 ntTSL 2 BASIC7.77□□□□□ -1.17
RFX1P22670 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 CAP1P2-201ENST00000417455 1409 ntBASIC7.77□□□□□ -1.17
RFX1P22670 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
RFX1P22670 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC7.77□□□□□ -1.17
RFX1P22670 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 IFNW1-201ENST00000380229 1932 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
RFX1P22670 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
RFX1P22670 AC015871.3-201ENST00000618835 2261 ntBASIC7.76□□□□□ -1.17
RFX1P22670 SATL1-201ENST00000395409 2192 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RFX1P22670 IFT74-204ENST00000443698 2163 ntAPPRIS P1 TSL 5 BASIC7.76□□□□□ -1.17
RFX1P22670 MKL2-209ENST00000574045 3309 ntAPPRIS P3 TSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 AC078880.4-201ENST00000617627 1749 ntBASIC7.76□□□□□ -1.17
RFX1P22670 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 FGF7P2-201ENST00000332473 296 ntBASIC7.76□□□□□ -1.17
RFX1P22670 SNORA70.8-201ENST00000384231 136 ntBASIC7.76□□□□□ -1.17
RFX1P22670 RNU6-729P-201ENST00000384399 107 ntBASIC7.76□□□□□ -1.17
RFX1P22670 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 VN1R12P-201ENST00000403778 876 ntBASIC7.76□□□□□ -1.17
RFX1P22670 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC7.76□□□□□ -1.17
RFX1P22670 AL773545.3-201ENST00000414297 706 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.76□□□□□ -1.17
RFX1P22670 UBTFL3-201ENST00000418934 1024 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC008753.1-201ENST00000423096 284 ntBASIC7.76□□□□□ -1.17
RFX1P22670 NPM1P22-201ENST00000427761 952 ntBASIC7.76□□□□□ -1.17
RFX1P22670 SKP1P3-201ENST00000429280 487 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AL512286.1-201ENST00000439244 400 ntBASIC7.76□□□□□ -1.17
RFX1P22670 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC7.76□□□□□ -1.17
RFX1P22670 FREM2-AS1-201ENST00000448887 465 ntTSL 2 BASIC7.76□□□□□ -1.17
RFX1P22670 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC7.76□□□□□ -1.17
RFX1P22670 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 AL390728.3-201ENST00000452704 270 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC022080.2-201ENST00000452932 533 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC7.76□□□□□ -1.17
RFX1P22670 UBTFL6-201ENST00000477929 1024 ntBASIC7.76□□□□□ -1.17
RFX1P22670 RPS10P20-201ENST00000494130 463 ntBASIC7.76□□□□□ -1.17
RFX1P22670 SETP14-201ENST00000497538 873 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.76□□□□□ -1.17
RFX1P22670 BNIP3P41-201ENST00000503774 571 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC7.76□□□□□ -1.17
RFX1P22670 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC7.76□□□□□ -1.17
RFX1P22670 PGAM4P2-201ENST00000512491 721 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC096661.1-201ENST00000515870 822 ntBASIC7.76□□□□□ -1.17
RFX1P22670 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
RFX1P22670 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC7.76□□□□□ -1.17
RFX1P22670 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC7.76□□□□□ -1.17
RFX1P22670 PRR13P5-201ENST00000596581 442 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AL606834.2-201ENST00000602954 668 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AL031777.2-201ENST00000611953 196 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC087633.2-208ENST00000612877 502 ntTSL 5 BASIC7.76□□□□□ -1.17
RFX1P22670 AC234782.5-201ENST00000617723 324 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC095031.1-201ENST00000623685 672 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC021106.3-201ENST00000623925 531 ntBASIC7.76□□□□□ -1.17
RFX1P22670 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC7.76□□□□□ -1.17
RFX1P22670 LAMTOR5-AS1-248ENST00000630488 703 ntTSL 5 BASIC7.76□□□□□ -1.17
RFX1P22670 AC007603.3-201ENST00000636915 979 ntBASIC7.76□□□□□ -1.17
RFX1P22670 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.76□□□□□ -1.17
RFX1P22670 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 AC009264.1-207ENST00000425981 1538 ntTSL 2 BASIC7.76□□□□□ -1.17
RFX1P22670 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 AL161912.4-201ENST00000623889 2468 ntBASIC7.76□□□□□ -1.17
RFX1P22670 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC7.76□□□□□ -1.17
RFX1P22670 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 TAT-201ENST00000355962 3983 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
RFX1P22670 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC7.76□□□□□ -1.17
RFX1P22670 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC7.75□□□□□ -1.17
RFX1P22670 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.75□□□□□ -1.17
RFX1P22670 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RFX1P22670 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.75□□□□□ -1.17
RFX1P22670 NSUN4-208ENST00000498008 3867 ntTSL 2 BASIC7.75□□□□□ -1.17
RFX1P22670 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.75□□□□□ -1.17
RFX1P22670 CASC19-284ENST00000642142 1868 ntBASIC7.75□□□□□ -1.17
RFX1P22670 CA10-204ENST00000570565 2276 ntTSL 5 BASIC7.75□□□□□ -1.17
RFX1P22670 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC7.75□□□□□ -1.17
RFX1P22670 AC105749.1-201ENST00000631338 2008 ntBASIC7.75□□□□□ -1.17
RFX1P22670 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC7.75□□□□□ -1.17
RFX1P22670 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms