Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
USF1P22415 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.74□□□□□ -1.65
USF1P22415 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.74□□□□□ -1.65
USF1P22415 AC109446.4-201ENST00000623235 2755 ntBASIC4.74□□□□□ -1.65
USF1P22415 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC4.74□□□□□ -1.65
USF1P22415 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
USF1P22415 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
USF1P22415 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 NAMPTP1-201ENST00000440465 2514 ntBASIC4.74□□□□□ -1.65
USF1P22415 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.74□□□□□ -1.65
USF1P22415 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
USF1P22415 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USF1P22415 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
USF1P22415 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.73□□□□□ -1.65
USF1P22415 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USF1P22415 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
USF1P22415 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
USF1P22415 AP000473.2-201ENST00000602659 1537 ntBASIC4.73□□□□□ -1.65
USF1P22415 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.73□□□□□ -1.65
USF1P22415 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USF1P22415 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USF1P22415 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USF1P22415 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
USF1P22415 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.73□□□□□ -1.65
USF1P22415 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
USF1P22415 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
USF1P22415 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.73□□□□□ -1.65
USF1P22415 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC4.73□□□□□ -1.65
USF1P22415 VN1R21P-201ENST00000426703 765 ntBASIC4.73□□□□□ -1.65
USF1P22415 NPM1P22-201ENST00000427761 952 ntBASIC4.73□□□□□ -1.65
USF1P22415 RPL7L1P9-201ENST00000431298 745 ntBASIC4.73□□□□□ -1.65
USF1P22415 CYCSP12-201ENST00000437729 300 ntBASIC4.73□□□□□ -1.65
USF1P22415 AP000547.1-201ENST00000454360 617 ntBASIC4.73□□□□□ -1.65
USF1P22415 RPL7P45-201ENST00000455851 743 ntBASIC4.73□□□□□ -1.65
USF1P22415 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
USF1P22415 AC104849.1-201ENST00000462623 405 ntBASIC4.73□□□□□ -1.65
USF1P22415 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.73□□□□□ -1.65
USF1P22415 UBA52P7-201ENST00000486088 380 ntBASIC4.73□□□□□ -1.65
USF1P22415 AC024558.1-201ENST00000505008 528 ntBASIC4.73□□□□□ -1.65
USF1P22415 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.73□□□□□ -1.65
USF1P22415 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.73□□□□□ -1.65
USF1P22415 AC010547.7-201ENST00000570323 333 ntBASIC4.73□□□□□ -1.65
USF1P22415 AL513327.3-201ENST00000602618 469 ntBASIC4.73□□□□□ -1.65
USF1P22415 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC4.73□□□□□ -1.65
USF1P22415 AC004948.1-201ENST00000609858 672 ntBASIC4.73□□□□□ -1.65
USF1P22415 MIR7155-201ENST00000615925 56 ntBASIC4.73□□□□□ -1.65
USF1P22415 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
USF1P22415 EEF1A1P14-201ENST00000421195 1376 ntBASIC4.73□□□□□ -1.65
USF1P22415 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.73□□□□□ -1.65
USF1P22415 MFSD8-219ENST00000641228 2559 ntBASIC4.73□□□□□ -1.65
USF1P22415 AC004158.1-201ENST00000564508 4319 ntBASIC4.73□□□□□ -1.65
USF1P22415 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USF1P22415 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
USF1P22415 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
USF1P22415 AC093909.5-201ENST00000621839 1799 ntBASIC4.73□□□□□ -1.65
USF1P22415 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC4.72□□□□□ -1.65
USF1P22415 LINC01963-201ENST00000562038 3148 ntBASIC4.72□□□□□ -1.65
USF1P22415 AC004076.2-201ENST00000620532 3323 ntBASIC4.72□□□□□ -1.65
USF1P22415 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
USF1P22415 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC4.72□□□□□ -1.65
USF1P22415 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.72□□□□□ -1.65
USF1P22415 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
USF1P22415 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
USF1P22415 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
USF1P22415 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
USF1P22415 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.72□□□□□ -1.65
USF1P22415 RN7SKP279-201ENST00000411383 298 ntBASIC4.72□□□□□ -1.65
USF1P22415 AC006455.6-201ENST00000426192 893 ntBASIC4.72□□□□□ -1.65
USF1P22415 AL139148.1-201ENST00000427122 680 ntBASIC4.72□□□□□ -1.65
USF1P22415 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC4.72□□□□□ -1.65
USF1P22415 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC4.72□□□□□ -1.65
USF1P22415 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.72□□□□□ -1.65
USF1P22415 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.72□□□□□ -1.65
USF1P22415 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.72□□□□□ -1.65
USF1P22415 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.72□□□□□ -1.65
USF1P22415 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 RN7SL727P-201ENST00000482164 296 ntBASIC4.72□□□□□ -1.65
USF1P22415 AC004815.1-201ENST00000484185 331 ntBASIC4.72□□□□□ -1.65
USF1P22415 AC073610.1-201ENST00000489971 396 ntBASIC4.72□□□□□ -1.65
USF1P22415 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.72□□□□□ -1.65
USF1P22415 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.72□□□□□ -1.65
USF1P22415 AC147055.3-201ENST00000510547 851 ntBASIC4.72□□□□□ -1.65
USF1P22415 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
USF1P22415 AC021146.10-201ENST00000515628 706 ntBASIC4.72□□□□□ -1.65
USF1P22415 KCTD9P6-201ENST00000522306 950 ntBASIC4.72□□□□□ -1.65
USF1P22415 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.72□□□□□ -1.65
USF1P22415 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.72□□□□□ -1.65
USF1P22415 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms