Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 GCSHP4-201ENST00000538792 439 ntBASIC5.93□□□□□ -1.46
COL11A1P12107 AC063949.1-201ENST00000552900 865 ntBASIC5.93□□□□□ -1.46
COL11A1P12107 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC5.93□□□□□ -1.46
COL11A1P12107 AC073342.2-201ENST00000595842 1800 ntBASIC5.93□□□□□ -1.46
COL11A1P12107 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL11A1P12107 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL11A1P12107 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.93□□□□□ -1.46
COL11A1P12107 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL11A1P12107 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL11A1P12107 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
COL11A1P12107 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.93□□□□□ -1.46
COL11A1P12107 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC5.93□□□□□ -1.46
COL11A1P12107 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL11A1P12107 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL11A1P12107 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL11A1P12107 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
COL11A1P12107 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
COL11A1P12107 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL11A1P12107 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.93□□□□□ -1.46
COL11A1P12107 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.92□□□□□ -1.46
COL11A1P12107 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
COL11A1P12107 PLCH1-203ENST00000447496 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 OR9G4-201ENST00000302957 984 ntBASIC5.92□□□□□ -1.46
COL11A1P12107 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 AP002530.1-201ENST00000405705 684 ntBASIC5.92□□□□□ -1.46
COL11A1P12107 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.92□□□□□ -1.46
COL11A1P12107 OR4A17P-201ENST00000526032 904 ntBASIC5.92□□□□□ -1.46
COL11A1P12107 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.92□□□□□ -1.46
COL11A1P12107 CR381572.2-201ENST00000624852 397 ntBASIC5.92□□□□□ -1.46
COL11A1P12107 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.92□□□□□ -1.46
COL11A1P12107 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
COL11A1P12107 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC5.92□□□□□ -1.46
COL11A1P12107 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.92□□□□□ -1.46
COL11A1P12107 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.92□□□□□ -1.46
COL11A1P12107 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 OR8V1P-201ENST00000395193 873 ntBASIC5.92□□□□□ -1.46
COL11A1P12107 AL590399.4-201ENST00000436561 601 ntBASIC5.92□□□□□ -1.46
COL11A1P12107 AP000797.2-201ENST00000475768 606 ntBASIC5.92□□□□□ -1.46
COL11A1P12107 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC5.92□□□□□ -1.46
COL11A1P12107 AC097173.1-201ENST00000505862 819 ntBASIC5.92□□□□□ -1.46
COL11A1P12107 AP005131.7-201ENST00000610087 611 ntBASIC5.92□□□□□ -1.46
COL11A1P12107 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.92□□□□□ -1.46
COL11A1P12107 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.92□□□□□ -1.46
COL11A1P12107 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.92□□□□□ -1.46
COL11A1P12107 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.92□□□□□ -1.46
COL11A1P12107 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL11A1P12107 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
COL11A1P12107 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
COL11A1P12107 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
COL11A1P12107 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL11A1P12107 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL11A1P12107 AC016397.1-201ENST00000412463 242 ntBASIC5.91□□□□□ -1.46
COL11A1P12107 RPL12P17-201ENST00000432393 498 ntBASIC5.91□□□□□ -1.46
COL11A1P12107 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.91□□□□□ -1.46
COL11A1P12107 H3F3BP1-201ENST00000440551 403 ntBASIC5.91□□□□□ -1.46
COL11A1P12107 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.91□□□□□ -1.46
COL11A1P12107 RPL21P133-201ENST00000443666 476 ntBASIC5.91□□□□□ -1.46
COL11A1P12107 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.91□□□□□ -1.46
COL11A1P12107 AC079168.1-201ENST00000458741 345 ntBASIC5.91□□□□□ -1.46
COL11A1P12107 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.91□□□□□ -1.46
COL11A1P12107 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.91□□□□□ -1.46
COL11A1P12107 MIR4270-201ENST00000581799 70 ntBASIC5.91□□□□□ -1.46
COL11A1P12107 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.91□□□□□ -1.46
COL11A1P12107 AC008745.1-201ENST00000604064 271 ntBASIC5.91□□□□□ -1.46
COL11A1P12107 AL731566.2-201ENST00000618971 317 ntBASIC5.91□□□□□ -1.46
COL11A1P12107 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC5.91□□□□□ -1.46
COL11A1P12107 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL11A1P12107 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL11A1P12107 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.91□□□□□ -1.46
COL11A1P12107 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.91□□□□□ -1.46
COL11A1P12107 AL355488.2-201ENST00000609909 2850 ntBASIC5.91□□□□□ -1.46
COL11A1P12107 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL11A1P12107 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC5.91□□□□□ -1.46
COL11A1P12107 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
COL11A1P12107 RPL37A-210ENST00000491306 3647 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL11A1P12107 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
COL11A1P12107 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL11A1P12107 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL11A1P12107 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
COL11A1P12107 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
COL11A1P12107 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
COL11A1P12107 HMGB3P7-201ENST00000400214 611 ntBASIC5.9□□□□□ -1.46
COL11A1P12107 GTF2IP5-201ENST00000414608 731 ntBASIC5.9□□□□□ -1.46
COL11A1P12107 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.9□□□□□ -1.46
COL11A1P12107 EIF2S2P3-201ENST00000428356 999 ntBASIC5.9□□□□□ -1.46
COL11A1P12107 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.9□□□□□ -1.46
COL11A1P12107 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.9□□□□□ -1.46
COL11A1P12107 OR51K1P-201ENST00000510214 950 ntBASIC5.9□□□□□ -1.46
COL11A1P12107 AL671862.1-201ENST00000515851 349 ntBASIC5.9□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms