Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 CCDC11P1-201ENST00000503137 1162 ntBASIC7.19□□□□□ -1.26
HMGB1P09429 AC113367.2-201ENST00000505749 160 ntBASIC7.19□□□□□ -1.26
HMGB1P09429 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGB1P09429 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC7.19□□□□□ -1.26
HMGB1P09429 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGB1P09429 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC7.19□□□□□ -1.26
HMGB1P09429 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC7.19□□□□□ -1.26
HMGB1P09429 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC7.19□□□□□ -1.26
HMGB1P09429 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
HMGB1P09429 AP003033.2-201ENST00000528901 805 ntBASIC7.19□□□□□ -1.26
HMGB1P09429 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC7.19□□□□□ -1.26
HMGB1P09429 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGB1P09429 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC7.19□□□□□ -1.26
HMGB1P09429 AC121758.1-202ENST00000556917 658 ntBASIC7.19□□□□□ -1.26
HMGB1P09429 MTND4LP24-201ENST00000572277 291 ntBASIC7.19□□□□□ -1.26
HMGB1P09429 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.19□□□□□ -1.26
HMGB1P09429 AC002069.2-201ENST00000603580 883 ntBASIC7.19□□□□□ -1.26
HMGB1P09429 AC123768.4-201ENST00000616244 701 ntBASIC7.19□□□□□ -1.26
HMGB1P09429 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGB1P09429 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HMGB1P09429 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
HMGB1P09429 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
HMGB1P09429 AC104118.1-201ENST00000607625 1589 ntBASIC7.19□□□□□ -1.26
HMGB1P09429 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.19□□□□□ -1.26
HMGB1P09429 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC7.19□□□□□ -1.26
HMGB1P09429 AL512283.1-201ENST00000606756 1384 ntBASIC7.19□□□□□ -1.26
HMGB1P09429 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGB1P09429 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGB1P09429 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
HMGB1P09429 AC093535.2-201ENST00000624769 2326 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGB1P09429 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGB1P09429 MIR16-2-201ENST00000362117 81 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGB1P09429 TPT1-204ENST00000379060 764 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGB1P09429 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGB1P09429 VN1R42P-201ENST00000424651 344 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGB1P09429 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGB1P09429 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGB1P09429 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC7.18□□□□□ -1.26
HMGB1P09429 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGB1P09429 EEF1A1P1-201ENST00000447052 739 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGB1P09429 RN7SL254P-201ENST00000460609 284 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 RN7SL836P-201ENST00000476140 296 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 AC011037.1-201ENST00000483964 558 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 HMGN1P17-201ENST00000513734 295 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 CR383658.1-201ENST00000514609 734 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC7.18□□□□□ -1.26
HMGB1P09429 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGB1P09429 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC7.18□□□□□ -1.26
HMGB1P09429 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGB1P09429 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.18□□□□□ -1.26
HMGB1P09429 AP003049.1-201ENST00000529418 457 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC7.18□□□□□ -1.26
HMGB1P09429 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
HMGB1P09429 NF1P5-201ENST00000588287 448 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC7.18□□□□□ -1.26
HMGB1P09429 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC7.18□□□□□ -1.26
HMGB1P09429 RPL21P136-201ENST00000605378 396 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 AL645933.2-201ENST00000606743 1207 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC7.18□□□□□ -1.26
HMGB1P09429 uc_338.29-201ENST00000615099 168 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 AL355974.3-201ENST00000617383 467 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 AC069234.4-201ENST00000621276 412 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 ATE1-AS1-202ENST00000636460 506 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 AL357140.4-201ENST00000636827 412 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 MIR193BHG-214ENST00000641765 509 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGB1P09429 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HMGB1P09429 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGB1P09429 AL731532.1-201ENST00000623972 4236 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC7.18□□□□□ -1.26
HMGB1P09429 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HMGB1P09429 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
HMGB1P09429 MAPK10-304ENST00000641341 3984 ntBASIC7.18□□□□□ -1.26
HMGB1P09429 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.17□□□□□ -1.26
HMGB1P09429 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HMGB1P09429 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGB1P09429 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
HMGB1P09429 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HMGB1P09429 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGB1P09429 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC7.17□□□□□ -1.26
HMGB1P09429 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HMGB1P09429 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGB1P09429 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGB1P09429 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HMGB1P09429 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HMGB1P09429 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HMGB1P09429 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HMGB1P09429 YWHAZP6-201ENST00000399764 738 ntBASIC7.17□□□□□ -1.26
HMGB1P09429 AL359885.1-201ENST00000415786 903 ntBASIC7.17□□□□□ -1.26
HMGB1P09429 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC7.17□□□□□ -1.26
HMGB1P09429 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGB1P09429 MTND6P12-201ENST00000428247 522 ntBASIC7.17□□□□□ -1.26
HMGB1P09429 AC108479.1-201ENST00000431142 427 ntBASIC7.17□□□□□ -1.26
HMGB1P09429 AC096632.2-201ENST00000438139 1239 ntBASIC7.17□□□□□ -1.26
HMGB1P09429 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC7.17□□□□□ -1.26
HMGB1P09429 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms