Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.86□□□□□ -1.47
VTNP04004 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.86□□□□□ -1.47
VTNP04004 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VTNP04004 AC090953.1-201ENST00000604305 1092 ntBASIC5.86□□□□□ -1.47
VTNP04004 AC133644.2-201ENST00000608142 540 ntBASIC5.86□□□□□ -1.47
VTNP04004 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.86□□□□□ -1.47
VTNP04004 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.86□□□□□ -1.47
VTNP04004 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VTNP04004 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.86□□□□□ -1.47
VTNP04004 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VTNP04004 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VTNP04004 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VTNP04004 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VTNP04004 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
VTNP04004 AC140479.2-201ENST00000421567 3130 ntBASIC5.85□□□□□ -1.47
VTNP04004 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VTNP04004 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.85□□□□□ -1.47
VTNP04004 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
VTNP04004 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VTNP04004 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.85□□□□□ -1.47
VTNP04004 AC079097.1-201ENST00000512187 1399 ntBASIC5.85□□□□□ -1.47
VTNP04004 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.85□□□□□ -1.47
VTNP04004 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.85□□□□□ -1.47
VTNP04004 AC211486.3-201ENST00000412694 621 ntBASIC5.85□□□□□ -1.47
VTNP04004 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.85□□□□□ -1.47
VTNP04004 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.85□□□□□ -1.47
VTNP04004 RPL34P27-201ENST00000428810 349 ntBASIC5.85□□□□□ -1.47
VTNP04004 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.85□□□□□ -1.47
VTNP04004 RPL7P61-201ENST00000451721 751 ntBASIC5.85□□□□□ -1.47
VTNP04004 snoU13.29-201ENST00000459370 104 ntBASIC5.85□□□□□ -1.47
VTNP04004 RPL7P40-201ENST00000481703 745 ntBASIC5.85□□□□□ -1.47
VTNP04004 AC109462.1-201ENST00000491087 368 ntBASIC5.85□□□□□ -1.47
VTNP04004 AC091912.1-201ENST00000511351 248 ntBASIC5.85□□□□□ -1.47
VTNP04004 RN7SKP66-201ENST00000516681 231 ntBASIC5.85□□□□□ -1.47
VTNP04004 SCARNA20.4-201ENST00000516969 131 ntBASIC5.85□□□□□ -1.47
VTNP04004 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.85□□□□□ -1.47
VTNP04004 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.85□□□□□ -1.47
VTNP04004 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.85□□□□□ -1.47
VTNP04004 AC134349.2-201ENST00000535136 910 ntBASIC5.85□□□□□ -1.47
VTNP04004 AC024940.3-201ENST00000538551 316 ntBASIC5.85□□□□□ -1.47
VTNP04004 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.85□□□□□ -1.47
VTNP04004 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.85□□□□□ -1.47
VTNP04004 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.85□□□□□ -1.47
VTNP04004 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.85□□□□□ -1.47
VTNP04004 AP002884.5-201ENST00000595053 1132 ntBASIC5.85□□□□□ -1.47
VTNP04004 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VTNP04004 AC015712.7-201ENST00000615211 635 ntBASIC5.85□□□□□ -1.47
VTNP04004 AC138627.1-204ENST00000641894 765 ntBASIC5.85□□□□□ -1.47
VTNP04004 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
VTNP04004 AC139426.3-201ENST00000605648 2059 ntBASIC5.85□□□□□ -1.47
VTNP04004 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VTNP04004 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.85□□□□□ -1.47
VTNP04004 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.85□□□□□ -1.47
VTNP04004 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
VTNP04004 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VTNP04004 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
VTNP04004 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VTNP04004 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VTNP04004 AC073429.2-201ENST00000569694 1444 ntBASIC5.84□□□□□ -1.47
VTNP04004 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VTNP04004 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
VTNP04004 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.84□□□□□ -1.47
VTNP04004 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VTNP04004 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VTNP04004 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.84□□□□□ -1.47
VTNP04004 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
VTNP04004 RNU1-146P-201ENST00000364015 165 ntBASIC5.84□□□□□ -1.47
VTNP04004 CCL7-202ENST00000394627 696 ntTSL 3 BASIC5.84□□□□□ -1.47
VTNP04004 AL589647.1-201ENST00000402485 466 ntBASIC5.84□□□□□ -1.47
VTNP04004 PPIAP9-201ENST00000403866 498 ntBASIC5.84□□□□□ -1.47
VTNP04004 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.84□□□□□ -1.47
VTNP04004 RN7SKP125-201ENST00000410481 302 ntBASIC5.84□□□□□ -1.47
VTNP04004 AC093162.1-201ENST00000419682 124 ntBASIC5.84□□□□□ -1.47
VTNP04004 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.84□□□□□ -1.47
VTNP04004 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
VTNP04004 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.84□□□□□ -1.47
VTNP04004 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.84□□□□□ -1.47
VTNP04004 AC022784.5-201ENST00000522241 437 ntBASIC5.84□□□□□ -1.47
VTNP04004 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.84□□□□□ -1.47
VTNP04004 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.84□□□□□ -1.47
VTNP04004 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
VTNP04004 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.84□□□□□ -1.47
VTNP04004 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.84□□□□□ -1.47
VTNP04004 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.84□□□□□ -1.47
VTNP04004 AC009027.1-201ENST00000604510 479 ntBASIC5.84□□□□□ -1.47
VTNP04004 AC005252.1-201ENST00000604518 1063 ntBASIC5.84□□□□□ -1.47
VTNP04004 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.84□□□□□ -1.47
VTNP04004 AL138960.1-201ENST00000613838 513 ntBASIC5.84□□□□□ -1.47
VTNP04004 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.84□□□□□ -1.47
VTNP04004 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.84□□□□□ -1.47
VTNP04004 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VTNP04004 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
VTNP04004 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
VTNP04004 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
VTNP04004 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.83□□□□□ -1.48
VTNP04004 RNA5SP305-201ENST00000362665 119 ntBASIC5.83□□□□□ -1.48
VTNP04004 AL645733.1-201ENST00000402250 217 ntBASIC5.83□□□□□ -1.48
VTNP04004 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VTNP04004 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.83□□□□□ -1.48
VTNP04004 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms