Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
MBD4O95243 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 CDC27P2-201ENST00000425026 1922 ntBASIC6.57□□□□□ -1.36
MBD4O95243 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
MBD4O95243 RNU6-618P-201ENST00000363518 112 ntBASIC6.57□□□□□ -1.36
MBD4O95243 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
MBD4O95243 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.57□□□□□ -1.36
MBD4O95243 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC6.57□□□□□ -1.36
MBD4O95243 AL161722.1-201ENST00000446972 1032 ntBASIC6.57□□□□□ -1.36
MBD4O95243 AC105399.1-202ENST00000447303 205 ntBASIC6.57□□□□□ -1.36
MBD4O95243 RPS23P9-201ENST00000448848 438 ntBASIC6.57□□□□□ -1.36
MBD4O95243 AC074386.1-201ENST00000476560 767 ntBASIC6.57□□□□□ -1.36
MBD4O95243 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.57□□□□□ -1.36
MBD4O95243 SEC11B-201ENST00000518383 499 ntBASIC6.57□□□□□ -1.36
MBD4O95243 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.57□□□□□ -1.36
MBD4O95243 OR7E10P-201ENST00000526420 991 ntBASIC6.57□□□□□ -1.36
MBD4O95243 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.57□□□□□ -1.36
MBD4O95243 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
MBD4O95243 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC6.57□□□□□ -1.36
MBD4O95243 RBM22P1-201ENST00000578589 1214 ntBASIC6.57□□□□□ -1.36
MBD4O95243 AP000769.2-201ENST00000602344 396 ntBASIC6.57□□□□□ -1.36
MBD4O95243 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.57□□□□□ -1.36
MBD4O95243 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.57□□□□□ -1.36
MBD4O95243 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
MBD4O95243 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
MBD4O95243 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.57□□□□□ -1.36
MBD4O95243 AC003985.2-201ENST00000562268 1669 ntBASIC6.57□□□□□ -1.36
MBD4O95243 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.57□□□□□ -1.36
MBD4O95243 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.57□□□□□ -1.36
MBD4O95243 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
MBD4O95243 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC6.57□□□□□ -1.36
MBD4O95243 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.57□□□□□ -1.36
MBD4O95243 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC6.57□□□□□ -1.36
MBD4O95243 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
MBD4O95243 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.56□□□□□ -1.36
MBD4O95243 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.56□□□□□ -1.36
MBD4O95243 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
MBD4O95243 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
MBD4O95243 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 OR13C3-201ENST00000374781 1108 ntBASIC6.56□□□□□ -1.36
MBD4O95243 RNU6-171P-201ENST00000384354 107 ntBASIC6.56□□□□□ -1.36
MBD4O95243 AL133388.1-201ENST00000404509 287 ntBASIC6.56□□□□□ -1.36
MBD4O95243 AL390774.1-201ENST00000411924 246 ntBASIC6.56□□□□□ -1.36
MBD4O95243 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.56□□□□□ -1.36
MBD4O95243 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC6.56□□□□□ -1.36
MBD4O95243 SRSF1P1-201ENST00000424058 520 ntBASIC6.56□□□□□ -1.36
MBD4O95243 RIMKLBP2-201ENST00000424737 654 ntBASIC6.56□□□□□ -1.36
MBD4O95243 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.56□□□□□ -1.36
MBD4O95243 NDUFA5P8-201ENST00000449019 346 ntBASIC6.56□□□□□ -1.36
MBD4O95243 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.56□□□□□ -1.36
MBD4O95243 AC110749.1-201ENST00000462007 357 ntBASIC6.56□□□□□ -1.36
MBD4O95243 COPS8P2-201ENST00000473228 627 ntBASIC6.56□□□□□ -1.36
MBD4O95243 RPS4XP1-201ENST00000482189 787 ntBASIC6.56□□□□□ -1.36
MBD4O95243 RN7SL629P-201ENST00000489622 285 ntBASIC6.56□□□□□ -1.36
MBD4O95243 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.56□□□□□ -1.36
MBD4O95243 MTND6P2-201ENST00000512226 524 ntBASIC6.56□□□□□ -1.36
MBD4O95243 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.56□□□□□ -1.36
MBD4O95243 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.56□□□□□ -1.36
MBD4O95243 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.56□□□□□ -1.36
MBD4O95243 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.56□□□□□ -1.36
MBD4O95243 AC126177.5-201ENST00000549599 178 ntBASIC6.56□□□□□ -1.36
MBD4O95243 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
MBD4O95243 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.56□□□□□ -1.36
MBD4O95243 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
MBD4O95243 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC6.56□□□□□ -1.36
MBD4O95243 AC005229.3-201ENST00000603438 323 ntBASIC6.56□□□□□ -1.36
MBD4O95243 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.56□□□□□ -1.36
MBD4O95243 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC6.56□□□□□ -1.36
MBD4O95243 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
MBD4O95243 CASC19-264ENST00000641912 1184 ntBASIC6.56□□□□□ -1.36
MBD4O95243 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.56□□□□□ -1.36
MBD4O95243 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
MBD4O95243 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
MBD4O95243 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.56□□□□□ -1.36
MBD4O95243 AL353796.1-201ENST00000561542 3241 ntBASIC6.55□□□□□ -1.36
MBD4O95243 AC004076.2-201ENST00000620532 3323 ntBASIC6.55□□□□□ -1.36
MBD4O95243 AC235565.1-201ENST00000456962 1325 ntBASIC6.55□□□□□ -1.36
MBD4O95243 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
MBD4O95243 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
MBD4O95243 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
MBD4O95243 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.55□□□□□ -1.36
MBD4O95243 AC232271.1-201ENST00000602455 2715 ntBASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms