Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 RPS27AP16-201ENST00000492222 470 ntBASIC2.26□□□□□ -2.05
USH2AO75445 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.26□□□□□ -2.05
USH2AO75445 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC2.26□□□□□ -2.05
USH2AO75445 AP003080.1-202ENST00000526526 915 ntBASIC2.26□□□□□ -2.05
USH2AO75445 AP005205.1-201ENST00000563503 508 ntBASIC2.26□□□□□ -2.05
USH2AO75445 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 AC100847.1-201ENST00000611316 481 ntBASIC2.26□□□□□ -2.05
USH2AO75445 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC2.26□□□□□ -2.05
USH2AO75445 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 AL450345.1-202ENST00000605741 3881 ntBASIC2.26□□□□□ -2.05
USH2AO75445 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 HSPD1P7-201ENST00000447985 1686 ntBASIC2.26□□□□□ -2.05
USH2AO75445 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.26□□□□□ -2.05
USH2AO75445 RPS29P9-201ENST00000440360 171 ntBASIC2.26□□□□□ -2.05
USH2AO75445 CEACAMP6-201ENST00000452007 574 ntBASIC2.26□□□□□ -2.05
USH2AO75445 RPL7P40-201ENST00000481703 745 ntBASIC2.26□□□□□ -2.05
USH2AO75445 MAL2-201ENST00000522112 573 ntTSL 4 BASIC2.26□□□□□ -2.05
USH2AO75445 CCNG2P1-201ENST00000549521 1000 ntBASIC2.26□□□□□ -2.05
USH2AO75445 NMNAT1P1-201ENST00000554095 876 ntBASIC2.26□□□□□ -2.05
USH2AO75445 CDC42EP3P1-201ENST00000601004 764 ntBASIC2.26□□□□□ -2.05
USH2AO75445 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 FAM91A3P-201ENST00000456826 2544 ntBASIC2.26□□□□□ -2.05
USH2AO75445 NSUN6-201ENST00000377304 2201 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 ZZEF1-201ENST00000381638 11456 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 AL731556.1-201ENST00000394628 3711 ntBASIC2.26□□□□□ -2.05
USH2AO75445 CHD3-202ENST00000358181 7286 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC2.26□□□□□ -2.05
USH2AO75445 RNU1-13P-201ENST00000384499 162 ntBASIC2.26□□□□□ -2.05
USH2AO75445 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.26□□□□□ -2.05
USH2AO75445 OR13K1P-201ENST00000444577 975 ntBASIC2.26□□□□□ -2.05
USH2AO75445 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 RPL12P39-201ENST00000455456 496 ntBASIC2.26□□□□□ -2.05
USH2AO75445 RN7SL319P-201ENST00000480656 221 ntBASIC2.26□□□□□ -2.05
USH2AO75445 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC2.26□□□□□ -2.05
USH2AO75445 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC2.26□□□□□ -2.05
USH2AO75445 RN7SL356P-201ENST00000582228 248 ntBASIC2.26□□□□□ -2.05
USH2AO75445 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 TACC2-210ENST00000369005 9673 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC2.26□□□□□ -2.05
USH2AO75445 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 TTC41P-205ENST00000551270 3963 ntBASIC2.26□□□□□ -2.05
USH2AO75445 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC2.26□□□□□ -2.05
USH2AO75445 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
USH2AO75445 AC006206.1-201ENST00000544842 3387 ntBASIC2.25□□□□□ -2.05
USH2AO75445 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC2.25□□□□□ -2.05
USH2AO75445 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC2.25□□□□□ -2.05
USH2AO75445 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 AC084783.1-201ENST00000565846 910 ntBASIC2.25□□□□□ -2.05
USH2AO75445 MIR4513-201ENST00000581077 86 ntBASIC2.25□□□□□ -2.05
USH2AO75445 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 AL023881.1-201ENST00000621088 301 ntBASIC2.25□□□□□ -2.05
USH2AO75445 UNC5C-201ENST00000453304 9875 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 MCM8-205ENST00000610722 7486 ntAPPRIS P4 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
USH2AO75445 DNAH9-203ENST00000454412 13452 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC2.25□□□□□ -2.05
USH2AO75445 AL121886.1-201ENST00000358609 435 ntBASIC2.25□□□□□ -2.05
USH2AO75445 5S_rRNA.1-201ENST00000364415 116 ntBASIC2.25□□□□□ -2.05
USH2AO75445 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC2.25□□□□□ -2.05
USH2AO75445 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC2.25□□□□□ -2.05
USH2AO75445 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC2.25□□□□□ -2.05
USH2AO75445 AC109464.1-201ENST00000511091 819 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms