Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CCDC188H7C350 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC188H7C350 AC109464.1-201ENST00000511091 819 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC188H7C350 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC188H7C350 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.66□□□□□ -1.5
CCDC188H7C350 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC5.66□□□□□ -1.5
CCDC188H7C350 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC188H7C350 AC027281.1-201ENST00000574178 758 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC188H7C350 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC188H7C350 LSM1P2-201ENST00000604911 322 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 OR51C1P-201ENST00000608504 942 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 AL159169.2-201ENST00000610061 1269 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 AC111152.1-202ENST00000635848 339 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 AC099654.6-201ENST00000636487 512 ntBASIC5.66□□□□□ -1.5
CCDC188H7C350 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC188H7C350 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
CCDC188H7C350 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.66□□□□□ -1.5
CCDC188H7C350 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC188H7C350 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC188H7C350 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC188H7C350 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC188H7C350 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC188H7C350 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CCDC188H7C350 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC188H7C350 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
CCDC188H7C350 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC188H7C350 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC188H7C350 MIR7-1-201ENST00000384871 110 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 DBIP1-201ENST00000401435 260 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 HMGB3P24-201ENST00000433260 622 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC188H7C350 CYCSP24-201ENST00000445119 316 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 AC012512.1-201ENST00000446594 718 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC188H7C350 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC188H7C350 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC188H7C350 AC022133.1-201ENST00000490961 571 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC188H7C350 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC188H7C350 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC188H7C350 AK4P6-201ENST00000505168 528 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC188H7C350 AC018797.1-201ENST00000510791 255 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 AC116917.1-201ENST00000520558 305 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC188H7C350 OR4V1P-201ENST00000525394 1140 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC188H7C350 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.65□□□□□ -1.5
CCDC188H7C350 AC121758.1-202ENST00000556917 658 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC188H7C350 DPPA2P4-201ENST00000563717 878 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.65□□□□□ -1.5
CCDC188H7C350 MIR4502-201ENST00000580432 81 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 AP000769.2-201ENST00000602344 396 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.65□□□□□ -1.5
CCDC188H7C350 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CCDC188H7C350 AL390318.1-201ENST00000624564 687 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 AP003400.3-201ENST00000624904 346 ntBASIC5.65□□□□□ -1.5
CCDC188H7C350 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC188H7C350 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC188H7C350 AC245100.2-201ENST00000454544 1679 ntBASIC5.65□□□□□ -1.51
CCDC188H7C350 SMG1P7-201ENST00000565246 2704 ntBASIC5.65□□□□□ -1.51
CCDC188H7C350 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC188H7C350 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.65□□□□□ -1.51
CCDC188H7C350 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CCDC188H7C350 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.65□□□□□ -1.51
CCDC188H7C350 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CCDC188H7C350 AC104966.1-201ENST00000467010 1464 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC188H7C350 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC188H7C350 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC188H7C350 AC008079.2-201ENST00000623543 20396 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AC005005.4-201ENST00000623789 16698 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC188H7C350 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
CCDC188H7C350 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CCDC188H7C350 AC017079.1-201ENST00000333650 415 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
CCDC188H7C350 RN7SKP250-201ENST00000363924 321 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 RNA5SP131-201ENST00000365452 119 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 RN7SKP86-201ENST00000410454 332 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC188H7C350 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC188H7C350 DPPA2P2-201ENST00000418220 897 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 AL121878.1-201ENST00000418638 859 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC188H7C350 PTP4A1P1-201ENST00000420539 515 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 RPL12P17-201ENST00000432393 498 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC188H7C350 PCNPP2-201ENST00000441651 455 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.64□□□□□ -1.51
CCDC188H7C350 AC068228.1-201ENST00000461723 211 ntBASIC5.64□□□□□ -1.51
CCDC188H7C350 AC105918.1-201ENST00000474399 838 ntBASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms