Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AC067773.1-201ENST00000603284 1094 ntBASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 AC008115.3-201ENST00000614874 549 ntBASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 AC025262.3-201ENST00000623666 360 ntBASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 AC073869.10-201ENST00000642016 354 ntBASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 AC006210.2-201ENST00000367074 1545 ntBASIC5.28□□□□□ -1.56
TRIM49D1C9J1S8 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC063976.2-201ENST00000425667 3556 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 RNA5SP433-201ENST00000364491 114 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 HMGN1P20-201ENST00000411849 300 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC104333.2-201ENST00000422630 192 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 NPM1P19-201ENST00000450070 712 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 BX842559.2-201ENST00000451418 605 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AL445665.1-202ENST00000452436 324 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC079168.1-201ENST00000458741 345 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 NRBF2P4-201ENST00000520874 850 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AP006245.2-201ENST00000522004 300 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC079600.1-201ENST00000550326 297 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 RN7SL708P-201ENST00000580952 299 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC009597.2-201ENST00000604659 592 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 LSM1P2-201ENST00000604911 322 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AC132068.1-201ENST00000623805 459 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 BRAFP1-201ENST00000445336 2703 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 HSPA8P14-201ENST00000552265 1805 ntBASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
TRIM49D1C9J1S8 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AC017079.1-201ENST00000333650 415 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 HSPA8P15-201ENST00000401676 786 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AL133388.1-201ENST00000404509 287 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 OR4K12P-201ENST00000406538 961 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AC093155.2-201ENST00000420734 937 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 PRUNEP1-201ENST00000425846 705 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 GAPDHP25-201ENST00000447061 1001 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AC105399.1-202ENST00000447303 205 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 RN7SL189P-201ENST00000468631 289 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 CYCSP22-201ENST00000517555 339 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 YWHABP2-201ENST00000540201 713 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AL049872.1-201ENST00000556323 322 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AC079315.1-201ENST00000602952 623 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 AC005252.1-201ENST00000604518 1063 ntBASIC5.26□□□□□ -1.57
TRIM49D1C9J1S8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms