Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 PPM1AP1-201ENST00000502740 1135 ntBASIC6.63□□□□□ -1.35
RGPD3A6NKT7 AC006427.1-201ENST00000514359 712 ntBASIC6.63□□□□□ -1.35
RGPD3A6NKT7 HMGB1P23-201ENST00000518743 568 ntBASIC6.63□□□□□ -1.35
RGPD3A6NKT7 AC012339.2-201ENST00000523996 453 ntBASIC6.63□□□□□ -1.35
RGPD3A6NKT7 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 NMNAT1P1-201ENST00000554095 876 ntBASIC6.63□□□□□ -1.35
RGPD3A6NKT7 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 EEF1A1P33-201ENST00000554413 1362 ntBASIC6.63□□□□□ -1.35
RGPD3A6NKT7 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
RGPD3A6NKT7 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 MIR129-1-201ENST00000384972 72 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 RPL12P34-201ENST00000424532 479 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 RPL12P20-201ENST00000475538 479 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 BNIP3P33-201ENST00000598912 569 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 AC067959.1-201ENST00000604334 379 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 AC005962.2-201ENST00000611427 652 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 RAPGEF4-214ENST00000538974 3920 ntTSL 2 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 CFLAR-201ENST00000309955 14672 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 AKR1C1-202ENST00000380872 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 ZNF106-201ENST00000263805 10460 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 RNU1-74P-201ENST00000384108 171 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 HSPA8P15-201ENST00000401676 786 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 AL049697.2-201ENST00000403708 294 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 AC122688.1-201ENST00000541494 223 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 MIR92B-201ENST00000607575 96 ntBASIC6.62□□□□□ -1.35
RGPD3A6NKT7 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
RGPD3A6NKT7 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 AC010928.1-201ENST00000592477 1447 ntBASIC6.61□□□□□ -1.35
RGPD3A6NKT7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 RSU1P3-201ENST00000412878 835 ntBASIC6.61□□□□□ -1.35
RGPD3A6NKT7 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 AL389915.1-201ENST00000422463 466 ntBASIC6.61□□□□□ -1.35
RGPD3A6NKT7 AURKAPS2-201ENST00000454983 333 ntBASIC6.61□□□□□ -1.35
RGPD3A6NKT7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 VN1R85P-201ENST00000601587 426 ntBASIC6.61□□□□□ -1.35
RGPD3A6NKT7 AL353729.2-201ENST00000605859 1249 ntBASIC6.61□□□□□ -1.35
RGPD3A6NKT7 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 ASB15-206ENST00000451558 4788 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.61□□□□□ -1.35
RGPD3A6NKT7 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
RGPD3A6NKT7 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
RGPD3A6NKT7 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.6□□□□□ -1.35
RGPD3A6NKT7 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms