Protein–RNA interactions for Protein: A2A3K4

PTPDC1, Protein tyrosine phosphatase domain-containing protein 1, humanhuman

Predictions only

Length 754 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1A2A3K4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 RNU6-468P-201ENST00000384003 109 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 SNORA17A-201ENST00000391185 133 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 ZNF602P-201ENST00000405929 924 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 MTND2P16-201ENST00000419987 799 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 MTCO1P51-201ENST00000427672 1060 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 MTND6P12-201ENST00000428247 522 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 HNRNPA1P18-201ENST00000433537 927 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AL663074.2-201ENST00000440621 479 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 EXOSC3P1-201ENST00000448649 500 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 RN7SL269P-201ENST00000467795 305 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 CYCSP20-201ENST00000473154 315 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 UBFD1P1-201ENST00000473259 814 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 PPIAP19-201ENST00000486414 492 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 HMGB1P38-201ENST00000490557 577 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC008629.2-201ENST00000503783 483 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC020699.1-201ENST00000505161 445 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 snoU109.5-201ENST00000516231 132 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC090424.1-201ENST00000535243 736 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AP001267.4-201ENST00000602598 545 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AL021918.2-201ENST00000613415 194 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC006963.1-201ENST00000624003 1052 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC004777.1-201ENST00000624317 287 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 SNORA17.5-201ENST00000630429 132 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 MTND2P41-201ENST00000637599 773 ntBASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
PTPDC1A2A3K4 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AP000547.3-204ENST00000588548 2523 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC012254.3-201ENST00000591183 2117 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 ZNF29P-201ENST00000225587 168 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 TMSB4XP4-201ENST00000323496 618 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 RN7SKP81-201ENST00000365603 331 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC234772.1-201ENST00000377927 937 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 RNU6-298P-201ENST00000390888 96 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 RPL35AP3-201ENST00000414680 288 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 UBE2V1P9-201ENST00000414760 368 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 GLUD1P9-201ENST00000420997 1173 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AL035660.1-201ENST00000422041 222 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 BX119321.1-201ENST00000428912 797 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AL035246.1-201ENST00000433554 1255 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AL445928.1-201ENST00000435545 222 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 TUBB4BP6-201ENST00000437576 479 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC044797.1-201ENST00000445744 679 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AP006222.1-205ENST00000450734 457 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 PFN1P6-201ENST00000476786 399 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AP001636.2-201ENST00000525517 696 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC087888.1-201ENST00000550884 1254 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC090888.2-201ENST00000559765 1144 ntBASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.91□□□□□ -1.3
PTPDC1A2A3K4 AC092134.1-201ENST00000563690 800 ntTSL 3 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms