Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 KCTD9P1-201ENST00000430462 1167 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC046176.1-201ENST00000435260 1170 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC012075.1-201ENST00000436549 580 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 TCEA1P3-201ENST00000443005 880 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 CYCSP51-201ENST00000443545 318 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 YWHAEP1-201ENST00000453697 763 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC021660.1-201ENST00000465006 554 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 RN7SL189P-201ENST00000468631 289 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 RPL35AP19-201ENST00000469425 329 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 HMGB1P40-201ENST00000525121 540 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 FGG-201ENST00000336098 1659 ntTSL 2 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 AC104623.2-202ENST00000623477 4002 ntBASIC4.75□□□□□ -1.65
TRAV27A0A087WT01 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AC011755.1-201ENST00000623763 2049 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AC005294.1-201ENST00000355509 281 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 RNA5SP335-201ENST00000363817 110 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 SDHDP6-201ENST00000414693 480 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 DSTNP5-201ENST00000427921 523 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 GAPDHP58-201ENST00000438477 1006 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 DNAJB5P1-201ENST00000454004 806 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AC100832.1-201ENST00000471945 383 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 RN7SL273P-201ENST00000481561 299 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AC027544.3-201ENST00000535082 757 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AP000619.2-201ENST00000546014 969 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AC114947.2-201ENST00000565748 2125 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AC002069.2-201ENST00000603580 883 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 MIR1910-201ENST00000636955 80 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 AL442128.2-201ENST00000620246 1824 ntBASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
TRAV27A0A087WT01 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AC006210.2-201ENST00000367074 1545 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 TMSB4XP4-201ENST00000323496 618 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 RNU1-77P-201ENST00000390868 162 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 HMGN2P27-201ENST00000427352 270 ntBASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.73□□□□□ -1.65
TRAV27A0A087WT01 SETP4-201ENST00000455717 868 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 156.2 ms