Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 HYALP1-201ENST00000417674 1279 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 TRGV7-201ENST00000427089 353 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 NXT1P1-201ENST00000458481 316 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 RPS23P6-201ENST00000466136 431 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 ATP5LP5-201ENST00000483050 299 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AC005363.1-201ENST00000530779 351 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AC079315.1-201ENST00000602952 623 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AL137072.1-201ENST00000603444 466 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 RN7SL544P-201ENST00000617232 284 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 RN7SL763P-201ENST00000620922 284 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AC087565.3-203ENST00000641018 837 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 MUC2-202ENST00000613187 4845 ntBASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
RHBDD3Q9Y3P4 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
RHBDD3Q9Y3P4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RHBDD3Q9Y3P4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
RHBDD3Q9Y3P4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
RHBDD3Q9Y3P4 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
RHBDD3Q9Y3P4 MRE11P1-201ENST00000464884 2127 ntBASIC4.84□□□□□ -1.64
RHBDD3Q9Y3P4 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
RHBDD3Q9Y3P4 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC079097.1-201ENST00000512187 1399 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC092681.1-201ENST00000297369 291 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 SNORA64.1-201ENST00000362600 132 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 RMRPP5-201ENST00000411156 267 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC127526.2-201ENST00000426436 775 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC073465.2-201ENST00000440938 498 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AL589765.3-201ENST00000446084 462 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 MTND4LP12-201ENST00000448237 295 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 MTND6P32-201ENST00000457611 483 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC011476.1-201ENST00000466725 307 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 OR10D4P-201ENST00000525892 951 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 PMS2P3-207ENST00000529061 717 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 HMGB1P42-201ENST00000532126 553 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AL390334.1-201ENST00000556395 450 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 DPPA2P4-201ENST00000563717 878 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 MIR4311-201ENST00000580794 100 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 MIR7853-201ENST00000584820 132 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC108865.2-201ENST00000606881 432 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 AC002525.1-201ENST00000624392 1622 ntBASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RHBDD3Q9Y3P4 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms