Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC027281.1-201ENST00000574178 758 ntBASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 RNU4ATAC-201ENST00000580972 127 ntBASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 FO393422.1-201ENST00000603908 708 ntBASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 AP002512.4-202ENST00000641599 4530 ntBASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.33□□□□□ -1.4
SSX2IPQ9Y2D8 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AL353625.1-202ENST00000366273 571 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AL353692.2-201ENST00000407054 335 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 BMS1P17-202ENST00000416720 316 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 MTCO2P17-201ENST00000424336 677 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 UBE2D3P3-201ENST00000426992 425 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 SUMO2P3-201ENST00000438311 288 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AL161722.1-201ENST00000446972 1032 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 RPL7L1P3-201ENST00000455249 689 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AL355032.1-201ENST00000472981 438 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 RN7SL466P-201ENST00000497546 295 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 MTCO2P9-201ENST00000503214 694 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC112198.4-201ENST00000515450 351 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC005000.1-201ENST00000536192 288 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AL121594.4-201ENST00000556211 1196 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 NPM1P5-201ENST00000557228 838 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC104695.2-201ENST00000605056 775 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC018926.1-201ENST00000616335 435 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 RN7SL544P-201ENST00000617232 284 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 RN7SL763P-201ENST00000620922 284 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 AC027279.4-201ENST00000624371 2072 ntBASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
SSX2IPQ9Y2D8 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC016583.1-201ENST00000624221 2431 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 MTCO1P7-201ENST00000419523 1542 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 AC116158.1-201ENST00000560231 2129 ntBASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
SSX2IPQ9Y2D8 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms