Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL021877.2-201ENST00000624442 10684 ntBASIC7.88□□□□□ -1.15
SHANK2Q9UPX8 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 COX6B1P1-201ENST00000415962 213 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 ZDHHC20P1-204ENST00000435787 423 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 NDUFA12P1-201ENST00000455914 406 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 RN7SKP67-201ENST00000515905 235 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 MIR1254-2-201ENST00000579553 63 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AL161616.1-201ENST00000611867 286 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AC144833.1-201ENST00000567953 4089 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 RN7SKP185-201ENST00000362813 326 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AC008072.1-201ENST00000434254 824 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AC093414.1-201ENST00000434712 514 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 REG1CP-206ENST00000447469 496 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AL513533.1-201ENST00000453728 415 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 RPL7P16-201ENST00000479738 738 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 AC091905.4-201ENST00000623432 202 ntBASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
SHANK2Q9UPX8 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 AC007996.1-201ENST00000620414 2821 ntBASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 Y_RNA.126-201ENST00000363382 111 ntBASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 AC009117.1-201ENST00000563948 554 ntBASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 MIR5096-201ENST00000583713 70 ntBASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 AC020910.2-201ENST00000603635 610 ntBASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 MEMO1P5-201ENST00000604810 406 ntBASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC7.86□□□□□ -1.15
SHANK2Q9UPX8 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 RPL32P3-201ENST00000359025 275 ntBASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 RN7SKP149-201ENST00000363008 344 ntBASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 RNU1-74P-201ENST00000384108 171 ntBASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 NOP56P2-201ENST00000447491 769 ntBASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 AC097173.1-201ENST00000505862 819 ntBASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 IGHVIII-47-1-201ENST00000518187 331 ntBASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 OR4A6P-201ENST00000534364 970 ntBASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 AC006210.2-201ENST00000367074 1545 ntBASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
SHANK2Q9UPX8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC7.84□□□□□ -1.15
SHANK2Q9UPX8 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms