Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 OR52B3P-201ENST00000314715 928 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 OR7E25P-201ENST00000344844 931 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 RN7SKP275-201ENST00000364626 301 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AL672138.1-201ENST00000450604 1015 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 LRRC37A14P-201ENST00000452297 462 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 LDHBP2-201ENST00000456969 1005 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC058823.1-201ENST00000485315 474 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 COX6B1P2-201ENST00000489624 230 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC022133.1-201ENST00000490961 571 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC006499.4-201ENST00000510947 694 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 RNA5SP271-201ENST00000516700 88 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 LSM3P2-201ENST00000551246 273 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC105036.1-201ENST00000566222 271 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AP001496.3-201ENST00000580230 913 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 MIR5010-201ENST00000582846 120 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC011626.1-201ENST00000604710 562 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AL122125.1-201ENST00000616999 600 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC129915.3-201ENST00000634128 948 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 AC106872.5-201ENST00000508856 1416 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.04□□□□□ -1.6
VAPAQ9P0L0 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VAPAQ9P0L0 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 RN7SKP28-201ENST00000364770 305 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 RN7SKP153-201ENST00000365026 316 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 RN7SKP16-201ENST00000410180 299 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 AC211486.3-201ENST00000412694 621 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 SRSF1P1-201ENST00000424058 520 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 BX119321.1-201ENST00000428912 797 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 AC046176.1-201ENST00000435260 1170 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 RNU7-157P-201ENST00000459600 66 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 RPS4XP12-201ENST00000461747 709 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 OR11I1P-201ENST00000486033 954 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 RPL9P15-201ENST00000491096 532 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 AC068993.1-201ENST00000546724 589 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 RBM22P12-201ENST00000567098 1255 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 RNU6-84P-201ENST00000607737 102 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 MTCO1P1-201ENST00000624263 1081 ntBASIC5.03□□□□□ -1.6
VAPAQ9P0L0 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
VAPAQ9P0L0 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AL031595.2-201ENST00000624215 19071 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VAPAQ9P0L0 AC104623.2-202ENST00000623477 4002 ntBASIC5.02□□□□□ -1.61
VAPAQ9P0L0 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 128.1 ms