Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 Y_RNA.201-201ENST00000364052 96 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 RNU4-68P-201ENST00000364314 141 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 ST13P16-201ENST00000401760 781 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AL132875.1-201ENST00000403623 949 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AL096711.1-201ENST00000404780 554 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 OR3A2-201ENST00000408891 1076 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC245096.1-201ENST00000413104 546 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC245060.4-201ENST00000413293 1121 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 UBE2V1P14-201ENST00000415815 558 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 RPS3AP44-201ENST00000425466 790 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 RPS26P24-201ENST00000497656 331 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC090958.1-201ENST00000511122 351 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 GAPDHP71-201ENST00000511530 1003 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC093770.1-201ENST00000511559 571 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 OR5BM1P-201ENST00000512021 366 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC117532.1-201ENST00000514638 323 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 NAT2-202ENST00000520116 716 ntTSL 3 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 IGKV2-18-201ENST00000522607 343 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 MTCYBP20-201ENST00000524239 1129 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC022404.1-201ENST00000555320 273 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC016839.1-201ENST00000578162 867 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 MIR4700-201ENST00000578311 74 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC020916.2-201ENST00000591242 360 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AL583856.2-201ENST00000606298 543 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AL136295.6-201ENST00000610486 658 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 MIR6809-201ENST00000612189 116 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC096708.4-201ENST00000620563 552 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 AC098679.5-201ENST00000624394 571 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 ATM-229ENST00000639953 587 ntTSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 MTND4P26-201ENST00000415971 1359 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 ADGRL3-206ENST00000507164 4982 ntTSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 Z83820.1-201ENST00000456978 1499 ntBASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
PDLIM7Q9NR12 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 UG0898H09-202ENST00000623646 7040 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AC006213.6-201ENST00000623722 4179 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 BX284632.2-201ENST00000421091 399 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AL390023.1-201ENST00000428836 262 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 MTCO1P43-201ENST00000431831 488 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AC046176.1-201ENST00000435260 1170 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AL512605.1-202ENST00000441919 381 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 GAPDHP23-201ENST00000444823 993 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AL359955.2-201ENST00000445380 353 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 RPS27AP3-201ENST00000453803 454 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 RANP2-201ENST00000456833 229 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 USP9YP25-201ENST00000457708 443 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 MTND4LP3-201ENST00000468320 276 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 RN7SL799P-201ENST00000475891 298 ntBASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.9□□□□□ -1.3
PDLIM7Q9NR12 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms