Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 NEPNP-201ENST00000404786 1371 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 CR383656.5-201ENST00000547616 1340 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 TMSB4XP2-201ENST00000335179 210 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 RN7SKP275-201ENST00000364626 301 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 MIR621-201ENST00000384919 96 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 RN7SKP240-201ENST00000410583 375 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AL035660.1-201ENST00000422041 222 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 ATP5A1P8-201ENST00000423669 1291 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 SETP10-201ENST00000424368 814 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC017019.1-201ENST00000426129 261 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 GTF3AP5-201ENST00000442645 697 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 RPS24P16-201ENST00000497294 392 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 IMPA1P1-201ENST00000510718 842 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC114781.3-201ENST00000512083 142 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC060775.1-201ENST00000518241 520 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 HMGN2P36-201ENST00000529541 409 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC027369.5-201ENST00000533838 755 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC090607.5-201ENST00000615692 224 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 OR8G3P-202ENST00000641572 1255 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 AL731566.1-201ENST00000620490 1937 ntBASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCNB1IP1Q9NPC3 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC007996.1-201ENST00000620414 2821 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC023490.2-201ENST00000359859 470 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 RNU1-146P-201ENST00000364015 165 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 MIR1203-201ENST00000408812 85 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC007738.1-201ENST00000413892 348 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 NIFKP3-201ENST00000417799 865 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AL359839.1-201ENST00000451975 1160 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AL358876.1-201ENST00000453364 1075 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 RN7SL273P-201ENST00000481561 299 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 PFN1P8-201ENST00000497012 543 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 TRIM77BP-201ENST00000524985 1119 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 MTND2P17-201ENST00000550281 688 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC127381.1-201ENST00000555979 939 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC108738.1-201ENST00000603703 237 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 IGLCOR22-2-201ENST00000605398 313 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 BNIP3P41-202ENST00000616656 861 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC097461.1-201ENST00000568928 2821 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC068870.1-201ENST00000563737 2455 ntBASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.06□□□□□ -1.6
CCNB1IP1Q9NPC3 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms