Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRTM1Q9HBL6 AC079298.1-201ENST00000625026 1619 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 RNU1-19P-201ENST00000363306 165 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 SNORA74A-201ENST00000364089 198 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 RNA5SP242-201ENST00000364171 118 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 RN7SKP292-201ENST00000365522 317 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 RNU4-2-201ENST00000365668 141 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 MIR143-201ENST00000385300 106 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 DBIP1-201ENST00000401435 260 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AC090018.1-201ENST00000434369 367 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 Z84478.1-201ENST00000438230 1219 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AC092754.1-201ENST00000472975 479 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 RN7SL273P-201ENST00000481561 299 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 RPS12P31-201ENST00000491419 398 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 RPS23P1-201ENST00000491662 432 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AL136038.1-201ENST00000497246 351 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 TMEM97P2-201ENST00000517841 403 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AL118522.2-201ENST00000616045 615 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 AC109583.2-201ENST00000617367 129 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 OR13C1P-202ENST00000641378 2919 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 MAPK10-328ENST00000641553 4009 ntBASIC5.19□□□□□ -1.58
LRTM1Q9HBL6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 U3.7-201ENST00000363668 216 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 RN7SKP28-201ENST00000364770 305 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 MIR937-201ENST00000401271 86 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 RN7SKP293-201ENST00000411389 296 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 OR2AT2P-201ENST00000413438 905 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 AC093155.2-201ENST00000420734 937 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 RPL34P3-201ENST00000421454 338 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 EEF1B2P6-201ENST00000445713 673 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 RN7SL610P-201ENST00000463845 291 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 RPS24P16-201ENST00000497294 392 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 AC016559.2-201ENST00000510759 359 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 AC026782.2-201ENST00000510845 636 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 AC112191.2-201ENST00000522428 333 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 RN7SL356P-201ENST00000582228 248 ntBASIC5.18□□□□□ -1.58
LRTM1Q9HBL6 AC010503.3-201ENST00000594355 540 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 96.1 ms