Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AL158050.2-201ENST00000605336 568 ntBASIC4.36□□□□□ -1.71
VGLL1Q99990 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC4.36□□□□□ -1.71
VGLL1Q99990 AC145423.1-201ENST00000605712 336 ntBASIC4.36□□□□□ -1.71
VGLL1Q99990 AL135999.3-201ENST00000610501 812 ntBASIC4.36□□□□□ -1.71
VGLL1Q99990 MIR6823-201ENST00000622118 61 ntBASIC4.36□□□□□ -1.71
VGLL1Q99990 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.36□□□□□ -1.71
VGLL1Q99990 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.36□□□□□ -1.71
VGLL1Q99990 AC073488.3-201ENST00000631611 778 ntBASIC4.36□□□□□ -1.71
VGLL1Q99990 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VGLL1Q99990 OR11H2-202ENST00000641517 1085 ntBASIC4.36□□□□□ -1.71
VGLL1Q99990 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC4.36□□□□□ -1.71
VGLL1Q99990 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.36□□□□□ -1.71
VGLL1Q99990 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VGLL1Q99990 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
VGLL1Q99990 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VGLL1Q99990 AC015813.6-201ENST00000624409 5808 ntBASIC4.36□□□□□ -1.71
VGLL1Q99990 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VGLL1Q99990 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.36□□□□□ -1.71
VGLL1Q99990 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.36□□□□□ -1.71
VGLL1Q99990 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
VGLL1Q99990 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.36□□□□□ -1.71
VGLL1Q99990 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.36□□□□□ -1.71
VGLL1Q99990 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
VGLL1Q99990 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
VGLL1Q99990 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.35□□□□□ -1.71
VGLL1Q99990 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC104260.2-201ENST00000623551 3497 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 RNU1-136P-201ENST00000384181 164 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
VGLL1Q99990 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.35□□□□□ -1.71
VGLL1Q99990 LSM5-203ENST00000409782 649 ntTSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 SETP15-201ENST00000412724 337 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AL035422.1-201ENST00000414193 397 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 RPL35AP3-201ENST00000414680 288 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AL359885.1-201ENST00000415786 903 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 MARK2P12-201ENST00000420129 585 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 RNGTTP1-201ENST00000420965 728 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 VN1R21P-201ENST00000426703 765 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AL512637.2-201ENST00000431287 1256 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AL353662.1-201ENST00000439099 327 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 ELOCP3-201ENST00000439303 348 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 MEMO1P4-201ENST00000453590 386 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AL157777.1-201ENST00000468100 304 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC090589.1-201ENST00000473109 362 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 RPL29P23-201ENST00000486188 442 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC069304.1-201ENST00000491593 704 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 RN7SL362P-201ENST00000494228 267 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 MTCO2P9-201ENST00000503214 694 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC113367.2-201ENST00000505749 160 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC105384.2-201ENST00000508433 640 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC108157.1-201ENST00000510511 539 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AP001000.1-201ENST00000526843 742 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 GTF2IP11-201ENST00000526931 420 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.35□□□□□ -1.71
VGLL1Q99990 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC4.35□□□□□ -1.71
VGLL1Q99990 MTND2P17-201ENST00000550281 688 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 LSM3P2-201ENST00000551246 273 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.35□□□□□ -1.71
VGLL1Q99990 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AP005262.1-201ENST00000582646 997 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC091057.3-201ENST00000602684 733 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AL357094.1-201ENST00000603845 844 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC068313.1-201ENST00000604028 1008 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.35□□□□□ -1.71
VGLL1Q99990 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 AC005156.1-201ENST00000613371 573 ntBASIC4.35□□□□□ -1.71
VGLL1Q99990 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VGLL1Q99990 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms