Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AC008938.1-201ENST00000566929 6510 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 RNU1-136P-201ENST00000384181 164 ntBASIC5.02□□□□□ -1.61
VPS13AQ96RL7 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AC010733.1-201ENST00000451515 401 ntBASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AC021106.1-201ENST00000509020 1058 ntBASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AC006427.1-201ENST00000514359 712 ntBASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AL121890.3-201ENST00000618494 516 ntBASIC5.02□□□□□ -1.61
VPS13AQ96RL7 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
VPS13AQ96RL7 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 RN7SKP280-201ENST00000364196 304 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 RIMKLBP2-201ENST00000424737 654 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 AL354714.3-201ENST00000447284 493 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 FTH1P25-201ENST00000447665 469 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 MTND2P28-201ENST00000457540 1044 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 AC009237.13-201ENST00000603193 276 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 F5-201ENST00000367796 7039 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 MIR670-201ENST00000390142 98 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 RPL23AP24-201ENST00000458203 385 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 AC109464.1-201ENST00000511091 819 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 AC093840.1-201ENST00000511599 336 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 AL035461.2-201ENST00000619201 524 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 AP000843.1-201ENST00000624880 701 ntBASIC5.01□□□□□ -1.61
VPS13AQ96RL7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
VPS13AQ96RL7 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5□□□□□ -1.61
VPS13AQ96RL7 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
VPS13AQ96RL7 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5□□□□□ -1.61
VPS13AQ96RL7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5□□□□□ -1.61
VPS13AQ96RL7 IGBP1P3-201ENST00000447449 1000 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 IGHVIII-13-1-201ENST00000517613 291 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5□□□□□ -1.61
VPS13AQ96RL7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5□□□□□ -1.61
VPS13AQ96RL7 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5□□□□□ -1.61
VPS13AQ96RL7 AL591034.3-201ENST00000605511 685 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC5□□□□□ -1.61
VPS13AQ96RL7 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 CLASP1-208ENST00000455322 5660 ntTSL 5 BASIC5□□□□□ -1.61
VPS13AQ96RL7 AC009962.1-201ENST00000567327 3813 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC5□□□□□ -1.61
VPS13AQ96RL7 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 AL391262.1-201ENST00000556558 1992 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 RPL12P43-201ENST00000420608 499 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 AC007568.1-201ENST00000422912 471 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC5□□□□□ -1.61
VPS13AQ96RL7 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC5□□□□□ -1.61
VPS13AQ96RL7 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
VPS13AQ96RL7 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 CBFA2T2-204ENST00000359606 7274 ntTSL 2 BASIC5□□□□□ -1.61
VPS13AQ96RL7 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 AL627171.1-201ENST00000618845 1308 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
VPS13AQ96RL7 AC016831.4-201ENST00000438302 307 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5□□□□□ -1.61
VPS13AQ96RL7 AC010326.1-201ENST00000462726 602 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5□□□□□ -1.61
VPS13AQ96RL7 SNORA31.9-201ENST00000516429 84 ntBASIC5□□□□□ -1.61
VPS13AQ96RL7 AP003080.1-202ENST00000526526 915 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms