Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 RPL12P18-201ENST00000437175 325 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 PPIAP10-201ENST00000438675 458 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 PPIAP27-201ENST00000453800 265 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 SEPT7P3-201ENST00000455017 621 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC023194.2-201ENST00000465398 406 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC104982.1-201ENST00000478775 574 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC021087.2-201ENST00000504656 1203 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 RNA5SP206-201ENST00000516703 121 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 OR4A17P-201ENST00000526032 904 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC090888.3-201ENST00000558917 509 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 MRPS21P8-201ENST00000569196 235 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC007346.1-201ENST00000569208 867 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 MIR132-201ENST00000591554 101 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 DYNLL1P1-201ENST00000595442 269 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC004890.3-201ENST00000605566 1095 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AL592494.3-201ENST00000609485 464 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC138965.3-201ENST00000623875 498 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AP003476.1-201ENST00000623984 516 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AP001962.1-201ENST00000624114 559 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC019080.5-201ENST00000624891 757 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 FRG1DP-201ENST00000635586 771 ntBASIC5.87□□□□□ -1.47
VPS50Q96JG6 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.87□□□□□ -1.47
VPS50Q96JG6 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
VPS50Q96JG6 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 BCORP1-203ENST00000513194 5093 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 HDAC1P2-201ENST00000453661 1398 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 MIR16-2-201ENST00000362117 81 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 PTP4A1P1-201ENST00000420539 515 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC013262.1-201ENST00000426710 252 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 RPS27AP6-201ENST00000427962 448 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 MTCYBP15-201ENST00000433123 1127 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 SNRPFP2-201ENST00000440710 251 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 TRIM60P16-201ENST00000444048 694 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 RPS26P41-201ENST00000450370 284 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC092865.4-201ENST00000477936 615 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC121161.1-201ENST00000510606 652 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 RNU5A-7P-201ENST00000515979 116 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC138832.1-201ENST00000522871 556 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC005363.1-201ENST00000530779 351 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC036111.2-201ENST00000533247 901 ntBASIC5.86□□□□□ -1.47
VPS50Q96JG6 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
VPS50Q96JG6 AC009852.2-201ENST00000567898 485 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 121.5 ms