Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC006840.1-201ENST00000623069 542 ntBASIC5.01□□□□□ -1.61
RFT1Q96AA3 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.01□□□□□ -1.61
RFT1Q96AA3 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
RFT1Q96AA3 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 RBPJP7-201ENST00000442803 1447 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 RBPJP5-201ENST00000449433 1447 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 SELENOWP1-201ENST00000322792 252 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 AL589826.1-201ENST00000340697 249 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RFT1Q96AA3 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5□□□□□ -1.61
RFT1Q96AA3 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5□□□□□ -1.61
RFT1Q96AA3 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 Z82198.3-201ENST00000421145 199 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 AL589765.3-201ENST00000446084 462 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 AC023245.1-201ENST00000468501 517 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 AC098847.1-201ENST00000473094 348 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 AC025181.1-201ENST00000477507 416 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 LARP7P4-201ENST00000481075 878 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 AC069304.1-201ENST00000491593 704 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 RN7SL591P-201ENST00000496150 292 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5□□□□□ -1.61
RFT1Q96AA3 PCNAP1-201ENST00000505363 709 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 ENPP7P11-201ENST00000505915 627 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC5□□□□□ -1.61
RFT1Q96AA3 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
RFT1Q96AA3 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5□□□□□ -1.61
RFT1Q96AA3 MIR7853-201ENST00000584820 132 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5□□□□□ -1.61
RFT1Q96AA3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5□□□□□ -1.61
RFT1Q96AA3 AL133370.2-201ENST00000619934 439 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 MIR6813-201ENST00000621638 56 ntBASIC5□□□□□ -1.61
RFT1Q96AA3 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5□□□□□ -1.61
RFT1Q96AA3 OR2AK2-202ENST00000641852 1008 ntAPPRIS P2 BASIC5□□□□□ -1.61
RFT1Q96AA3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5□□□□□ -1.61
RFT1Q96AA3 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5□□□□□ -1.61
RFT1Q96AA3 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RFT1Q96AA3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5□□□□□ -1.61
RFT1Q96AA3 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
RFT1Q96AA3 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
RFT1Q96AA3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5□□□□□ -1.61
RFT1Q96AA3 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5□□□□□ -1.61
RFT1Q96AA3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFT1Q96AA3 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
RFT1Q96AA3 AC011755.1-201ENST00000623763 2049 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFT1Q96AA3 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFT1Q96AA3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
RFT1Q96AA3 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 MIR130B-202ENST00000385018 82 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 AL034417.1-201ENST00000399343 800 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 AC233289.1-201ENST00000403700 508 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 AL589655.1-201ENST00000405398 482 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 RPL35AP3-201ENST00000414680 288 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC4.99□□□□□ -1.61
RFT1Q96AA3 AC046176.1-201ENST00000435260 1170 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 BTBD7P2-201ENST00000441962 620 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 BMS1P10-201ENST00000443754 1120 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 HMGB1P7-201ENST00000450921 612 ntBASIC4.99□□□□□ -1.61
RFT1Q96AA3 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms