Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AC112255.1-201ENST00000624070 2493 ntBASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 NPM1P36-201ENST00000415681 835 ntBASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AL035090.1-201ENST00000454835 332 ntBASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AC100832.1-201ENST00000471945 383 ntBASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AP000797.2-201ENST00000475768 606 ntBASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AC091953.3-201ENST00000623220 236 ntBASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AP003400.3-201ENST00000624904 346 ntBASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AL356317.1-201ENST00000396110 1436 ntBASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.52□□□□□ -1.53
SHROOM3Q8TF72 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 RNA5SP183-201ENST00000362452 119 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 SNORA70.6-201ENST00000383934 134 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AC013442.1-201ENST00000397347 228 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 RPL5P2-201ENST00000429598 854 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 RN7SL197P-201ENST00000466981 299 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 MRPS21P7-201ENST00000566937 238 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 RNF138P2-201ENST00000603490 592 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AL133406.3-201ENST00000606817 541 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 RPL26P29-201ENST00000415623 438 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 RPL19P16-201ENST00000433839 588 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 RPL7P39-201ENST00000481157 744 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 OR4A17P-201ENST00000526032 904 ntBASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC5.51□□□□□ -1.53
SHROOM3Q8TF72 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 RN7SKP6-201ENST00000364795 319 ntBASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 SRSF1P1-201ENST00000424058 520 ntBASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 RBMY2QP-201ENST00000429799 1147 ntBASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 AC021193.1-201ENST00000511607 420 ntBASIC5.5□□□□□ -1.53
SHROOM3Q8TF72 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 157.5 ms