Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 VN1R38P-201ENST00000450265 887 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 VN1R40P-201ENST00000455196 941 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC090602.1-201ENST00000469695 252 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 HMGN1P16-201ENST00000508308 283 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC093816.1-201ENST00000515076 913 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AP003066.2-201ENST00000529375 555 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC004923.2-201ENST00000529649 369 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC118942.1-201ENST00000529674 1035 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC124891.1-201ENST00000536322 519 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC093014.1-201ENST00000548926 724 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AL358913.1-201ENST00000554342 121 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC026898.1-201ENST00000586404 571 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 PCNAP1-202ENST00000595299 752 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC002487.1-201ENST00000604565 994 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC008121.2-201ENST00000614647 523 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AC090617.9-201ENST00000623751 147 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 AL049536.1-201ENST00000625043 744 ntBASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SIMC1Q8NDZ2 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SIMC1Q8NDZ2 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SIMC1Q8NDZ2 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.9□□□□□ -1.47
SIMC1Q8NDZ2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.9□□□□□ -1.47
SIMC1Q8NDZ2 AC119674.1-213ENST00000641177 1386 ntBASIC5.9□□□□□ -1.47
SIMC1Q8NDZ2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SIMC1Q8NDZ2 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SIMC1Q8NDZ2 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.9□□□□□ -1.47
SIMC1Q8NDZ2 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.9□□□□□ -1.47
SIMC1Q8NDZ2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 CASC19-246ENST00000641625 1606 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 ERG-202ENST00000398897 4651 ntTSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 ARHGAP15-201ENST00000295095 1775 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RNFT1P3-201ENST00000340898 1052 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RNU6-792P-201ENST00000363490 107 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RNA5SP478-201ENST00000364657 115 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RNU4-31P-201ENST00000384211 141 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 CHMP1B2P-201ENST00000399581 597 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 SKINT1L-201ENST00000401057 817 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC016769.2-201ENST00000414815 475 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 UBE2V1P14-201ENST00000415815 558 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AL590806.1-201ENST00000415818 853 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 HYALP1-201ENST00000417674 1279 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AL360013.1-201ENST00000419031 858 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 NDUFA5P10-201ENST00000432147 357 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC010468.1-201ENST00000461022 817 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RN7SL552P-201ENST00000462094 276 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 SLC25A51P1-201ENST00000468432 871 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RN7SL369P-201ENST00000477138 299 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC012123.2-201ENST00000485809 248 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 RN7SL714P-201ENST00000487050 298 ntBASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.89□□□□□ -1.47
SIMC1Q8NDZ2 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms