Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SEPT4-216ENST00000580844 1396 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 STAT2-202ENST00000418572 1548 ntTSL 2 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 TRIM51HP-202ENST00000530412 1823 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 SMR3A-201ENST00000226460 665 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 OR4F21-201ENST00000320901 995 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 LEMD1-201ENST00000367149 604 ntTSL 3 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 RNU6-317P-201ENST00000384031 107 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL356057.2-201ENST00000403318 432 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 RN7SKP266-201ENST00000410232 287 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 RNU2-6P-201ENST00000411404 190 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 OR5P4P-201ENST00000424698 917 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 Z74696.1-201ENST00000428208 1123 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC005077.3-202ENST00000437494 300 ntTSL 3 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL359711.1-201ENST00000441999 123 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC005840.2-201ENST00000447193 355 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 MTCO1P27-201ENST00000448269 226 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 TXNP3-201ENST00000454560 301 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 OR7E7P-201ENST00000455678 1012 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL034397.1-201ENST00000456392 908 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 PMCHL2-203ENST00000457791 237 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC096741.1-201ENST00000472250 846 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL355032.1-201ENST00000472981 438 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 RPL35P6-201ENST00000490024 372 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 RPL19P11-201ENST00000495944 589 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 THAP6-203ENST00000502620 582 ntTSL 3 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC108120.1-201ENST00000506543 991 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC138866.1-201ENST00000514522 497 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 RN7SKP190-201ENST00000516079 286 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 IGHVII-22-1-201ENST00000517888 265 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 CENPUP1-201ENST00000526649 1202 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL442663.2-201ENST00000554385 511 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC104046.1-201ENST00000559487 406 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 SOD1P2-201ENST00000563903 451 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC026458.1-201ENST00000564330 438 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC009716.1-201ENST00000583287 398 ntTSL 3 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL358394.3-202ENST00000599308 832 ntTSL 5 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 VDAC1P5-201ENST00000603132 844 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL391807.1-201ENST00000603261 712 ntTSL 5 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL133338.2-201ENST00000604292 736 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL359999.1-201ENST00000604513 294 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC018695.5-201ENST00000605872 315 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL080312.2-201ENST00000613001 630 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC131159.2-201ENST00000613236 702 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AL391903.2-201ENST00000614532 247 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC239600.2-201ENST00000619615 1165 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC006065.6-201ENST00000625201 545 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 NPEPPS-215ENST00000530173 2864 ntTSL 2 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 TMEM75-201ENST00000624314 2165 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 MAPK10-270ENST00000641102 3538 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 SPATA31C1-201ENST00000420021 3895 ntBASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
DEPDC4Q8N2C3 KIAA1958-203ENST00000536272 7650 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC020978.6-201ENST00000571197 3177 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC015871.3-201ENST00000618835 2261 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 LINC02282-201ENST00000535153 1655 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 SP110-203ENST00000358662 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AL021877.2-201ENST00000624442 10684 ntBASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 AC009318.1-201ENST00000553105 2380 ntTSL 2 BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 ORM1-201ENST00000259396 802 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 TSSK4-201ENST00000287913 1257 ntAPPRIS P3 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
DEPDC4Q8N2C3 RNU4-59P-201ENST00000364447 116 ntBASIC7.22□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms